LOC122327446


Basic Information

Item Value
gene id LOC122327446
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4053527 ~ 4059373 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220737
cATTTCAATTACATACTTGGTTATTACATTGTATTCAGCATGTGCAACCAACCATcgttcatttataaaaaataatctaaatttacatataaaaatatactatatatatatatatatatattgtacaatataatacatacaaacatgtttcaagaaactgaaacaaaacaagcattCATATTTACACTGATCAAATTAGAACTTATCTAACACAACTAgatacatttttccattttatatatatgatatatgagaTAATGTGAACTAATCATCTTAAAGCAACAGGAAGTGAACAAAGAAAGTGAATGCACAAACTGCTGTTAAAACGTctcaaatatttacagtatgttatAATTACAAAAGCATACATCGTTGAAACAAAATAGAaagatataatgtatttttatatattgggTTTCCGTGTTTTAGGGGGATTTTCCATAGGCGTGATGGTTTTTATTCTGTGCAGAcagtatgtgttattgttctacacctaaacccaccccttacaggaaactactggaatttttagattttcaaaaaattcaaTCCTGCATTTTCTATAAACTTGTGTCCCCACTAGGTCAacatttactggtattcctatccttgtcgGGACATTTGGTCCTAATAACGTGATAAAtaaggtgcacacacacacacacaaatagtgAAATTTGAAGGTAATAGAGAtaactgattaatattttattattaagcttATTAATATATAACCATGACTTGCTTGCtcataaaaggttttttttgtcagtccatgacaaaatgaatgcaataatgCAATTAACTAAAGCTTTTAATTGTGCCCGAATCCACTATAAATGAATCTAGAGATTCAAAAACCTCATATTTTGGTTTACTAATACTTGAACATaactaaatattcataattatttacacAGAAATCAGACAGAACACACAGAAATCAGACAGAATTGCAGATCCCACAGAAACAGAGGGACGTGCACATATATATCTCACCTCATTGTAACAGGCACCGTAAGGCTGCACagtttcaacaacaacaaatgaaatgaaacacaaTACTTGGGTTAATTGGAACGAATCTAATCTTGTCAGAGATTAAATTCTTGCTTGTGTAGATTTCCTGCGGCGCCAGTAAAtcacagcaacagcagcagcagcaaccgCCGTAAACAGAGCAACAACAAAATACGTGCTTCCTTTATTAGATGAAGGCACTTCTGAAT
>TU220738
AGCGGCAAACGCGCGTGAGCTGAGAATAAACGGACGATATCGTTGGCAAATATagttattgttatctttatagttgtCATGCTCGTTGTTGTCCATTAGGGAATGTTTGTGTGCGGAAGAGTTAAAAGTGCAGTGTGTAAATTTTAGCGGCTTCCAGAGGTGAGGTTATGAATTGCAACCAACTACGGAAGCTACGGTGAAGCTACGGTGAGAAGCTACGGTGGCCGATACAAGGTTATGTCGTAGTCTGAAACAGCGGATACGGCCAGCAATGAGGCCAGACTTGTGAGGAAGAAATCATTTACACTGATCCcactttccacaaaagaaaaGCACAGAGATCGtatGTTATAAAGGAAGATCATGTTGAGTATGCACCTATTGCCGTTAGGAGATGATCAAACATCAAACCTCTAAACTCTTTGAGTTTTGGGATTAGCATGAATCACCAGACGCAGCAGGATCATTCCGAAGCATGGCAGTTAAAGATGGATTCATGAAGCGGTACCTTTTTTGGAGCGCCGAGACTTTGAATTGATCTAAATCGTACGGACAATAGGAACGTCAAAGGCACCACGTGCgtaaatgccatttttaaaaaaaactgcaaaacgTAGATGCAAAAGCAGACCCTGCTTTGGTCTTTTTGATTCACATCTACACAGATATGTGGTTTTTTTGTTGGACAAACAGGTCCTGCGTGAGCTCGTGTCTGTGTGAGAGGTATCAATGGTGTGTGGTTGAACGTGTTTTTTCCATTCTGGTTCGCATATATGAAACCATTTGACTTTCACTTTGGTAAAAGCTGCaatttaatttctcattttccGATTTCCATTTCCATGGTTCAATGCTACCAGCCTGCAAACACGTCGCGGTGACGAAATTCATAAAGCTCACTGATCTAAACGCCTTCGAGCCGATACGAAGACACCGTGATGGCAAACTGAGGACAGCCATATTTGGTTCCGTATAAGAGTTTGTAGAGGTGTAATATCACACATATCTAAAATACTGCAGTGGAAAAGGTGTACATGTAGTATGCACGTATAGTCCGCAATACGTTTTTTCCGTCTCCGACGTGGTATAATGAACTATTCTCCAACTCGATGGAAACTATTCACTTTCAGTGCAGATGTAATACCTCGTT
>XM_043222818.1
ATGACTTTGACGACTTCTCTCTGCTGCCGTTGTGATGTTCCTTCAGTTCACATGTCAATAGCAGCTGCTTTCTGGCTTTGTATGAAAAAAACGCTGTCTTCATATTCTTCAGGTGTGTTCGGTGAGTCGGTGTCGGTGATGGAGGGAGATGCTGTCACTCTTACTGATGTTACTGAAATACATAAAGACAATGAAATAGTCTTGAAATTTGGACCAGCTAAACCAGTTAAAATCTTCCCCACACTTGATGTTCCTGGTGGGatattcagagacagactgaagctggacgatcaaactggatctctgaccatcatgaacgTCACGACTCAACACGCTGGAGTTTATCAGCTAGAGAGAGATGGAGTgaaatttacatataaaacgTATAACGTTTCTGTCTATgCTCGTCTGACTGTTCCTAACATCACCAGAGACtgttcttcatcttcatcaaatTGTTCGTTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCACTAAACTTTGTCAGACGTGTTCAGACTCAGTGTCTCTGATCACGTTGGTCTCTGTTTCTGCTGGATCTCTGTTGATCGTCGCTGCCGGGATCTTCTGCATCTGCAGGAGACACAGAAAAAGCGATCAAGAAGGCCAGACTTGTGAGGAAGAAATCATTTACACTGATCCcactttccacaaaagaaaaGCACAGAGATCGtatGTTATAAAGGAAGATCATGTTGAGTATGCACCTATTGCCGTTAGGAGATGATCAAACATCAAACCTCTAAACTCTTTGAGTTTTGGGATTAGCATGAATCACCAGACGCAGCAGGATCATTCCGAAGCATGGCAGTTAAAGATGGATTCATGAAGCGGTACCTTTTTTGGAGCGCCGAGACTTTGAATTGATCTAAATCGTACGGACAATAGGAACGTCAAAGGCACCACGTGCgtaaatgccatttttaaaaaaaactgcaaaacgTAGATGCAAAAGCAGACCCTGCTTTGGTCTTTTTGATTCACATCTACACAGATATGTGGTTTTTTTGTTGGACAAACAGGTCCTGCGTGAGCTCGTGTCTGTGTGAGAGGTATCAATGGTGTGTGGTTGAACGTGTTTTTTCCATTCTGGTTCGCATATATGAAACCATTTGACTTTCACTTTGGTAAAAGCTGCaatttaatttctcattttccGATTTCCATTTCCATGGTTCAATGCTACCAGCCTGCAAACACGTCGCGGTGACGAAATTCATAAAGCTCACTGATCTAAACGCCTTCGAGCCGATACGAAGACACCGTGATGGCAAACTGAGGACAGCCATATTTGGTTCCGTATAAGAGTTTGTAGAGGTGTAATATCACACATATCTAAAATACTGCAGTGGAAAAGGTGTACATGTAGTATGCACGTATAGTCCGCAATACGTTTTTTCCGTCTCCGACGTGGTATAATGAACTATTCTCCAACTCGATGGAAACTATTCACTTTCAGTGCAGATGTAATACCTCGTTATATAACAtcatatacatgtataacaataaaacaaattcatttaGATTGAATATATATACTTGATTTGGGCTGTTTGAAGTCATCAAATTGTTGAACGTTAAAATGTATtctcagtgttttattatatgaCTGACACACAGGCTATTTCAAGGATGTTCTCACTAACTTTCTGGGCCTTCAACGGGTCAGTTGCGCTGTTGTCCGTGcggggtcagaaagctcttggttttcataaaaaataccatcatttgtgttctgaatgcaaacaaatgacttacagatttgaaacaacatgaggctgagtaattaatgacagacgtttcatttatgggtgaacCAACCCCTTAAAAGTGTACAAGAGAAATGTATAGCCTACGTTATAGAGCATCATCTAGAGCCATAACCAAAAATCCATCTTCATCCTCACccaatttaaatacacacacacacacacacacacacaaaagcttttaaaatgacaatccgggaattaaaatcataattccAAAAATGAGAcgattttcagtgttttgatttaatttttattttaacacccATTTCAATTACATACTTGGTTATTACATTGTATTCAGCATGTGCAACCAACCATcgttcatttataaaaaataatctaaatttacatataaaaatatactatatatatatatatatatatatatatatatatatatatatatatactgtacaatataatacatacaaacatgtt
>XM_043222819.1
CTCACTTGTAGGTCGACGGCTTTTAGTGAATAGCATTATTTGATGAGACACTGAACAACCGAAATGTCTTACacgtttgttttattctgtttttgctGGTGGAGTCCGTCCGGTGTGTTCGGTGAGTCGGTGTCGGTGATGGAGGGAGATGCTGTCACTCTTACTGATGTTACTGAAATACATAAAGACAATGAAATAGTCTTGAAATTTGGACCAGCTAAACCAGTTAAAATCTTCCCCACACTTGATGTTCCTGGTGGGatattcagagacagactgaagctggacgatcaaactggatctctgaccatcatgaacgTCACGACTCAACACGCTGGAGTTTATCAGCTAGAGAGAGATGGAGTgaaatttacatataaaacgTATAACGTTTCTGTCTATgCTCGTCTGACTGTTCCTAACATCACCAGAGACtgttcttcatcttcatcaaatTGTTCGTTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCACTAAACTTTGTCAGACGTGTTCAGACTCAGTGTCTCTGATCACGTTGGTCTCTGTTTCTGCTGGATCTCTGTTGATCGTCGCTGCCGGGATCTTCTGCATCTGCAGGAGACACAGAAAAAGCGATCAAGAAGGCCAGACTTGTGAGGAAGAAATCATTTACACTGATCCcactttccacaaaagaaaaGCACAGAGATCGtatGTTATAAAGGAAGATCATGTTGAGTATGCACCTATTGCCGTTAGGAGATGATCAAACATCAAACCTCTAAACTCTTTGAGTTTTGGGATTAGCATGAATCACCAGACGCAGCAGGATCATTCCGAAGCATGGCAGTTAAAGATGGATTCATGAAGCGGTACCTTTTTTGGAGCGCCGAGACTTTGAATTGATCTAAATCGTACGGACAATAGGAACGTCAAAGGCACCACGTGCgtaaatgccatttttaaaaaaaactgcaaaacgTAGATGCAAAAGCAGACCCTGCTTTGGTCTTTTTGATTCACATCTACACAGATATGTGGTTTTTTTGTTGGACAAACAGGTCCTGCGTGAGCTCGTGTCTGTGTGAGAGGTATCAATGGTGTGTGGTTGAACGTGTTTTTTCCATTCTGGTTCGCATATATGAAACCATTTGACTTTCACTTTGGTAAAAGCTGCaatttaatttctcattttccGATTTCCATTTCCATGGTTCAATGCTACCAGCCTGCAAACACGTCGCGGTGACGAAATTCATAAAGCTCACTGATCTAAACGCCTTCGAGCCGATACGAAGACACCGTGATGGCAAACTGAGGACAGCCATATTTGGTTCCGTATAAGAGTTTGTAGAGGTGTAATATCACACATATCTAAAATACTGCAGTGGAAAAGGTGTACATGTAGTATGCACGTATAGTCCGCAATACGTTTTTTCCGTCTCCGACGTGGTATAATGAACTATTCTCCAACTCGATGGAAACTATTCACTTTCAGTGCAGATGTAATACCTCGTTATATAACAtcatatacatgtataacaataaaacaaattcatttaGATTGAATATATATACTTGATTTGGGCTGTTTGAAGTCATCAAATTGTTGAACGTTAAAATGTATtctcagtgttttattatatgaCTGACACACAGGCTATTTCAAGGATGTTCTCACTAACTTTCTGGGCCTTCAACGGGTCAGTTGCGCTGTTGTCCGTGcggggtcagaaagctcttggttttcataaaaaataccatcatttgtgttctgaatgcaaacaaatgacttacagatttgaaacaacatgaggctgagtaattaatgacagacgtttcatttatgggtgaacCAACCCCTTAAAAGTGTACAAGAGAAATGTATAGCCTACGTTATAGAGCATCATCTAGAGCCATAACCAAAAATCCATCTTCATCCTCACccaatttaaatacacacacacacacacacacacacaaaagcttttaaaatgacaatccgggaattaaaatcataattccAAAAATGAGAcgattttcagtgttttgatttaatttttattttaacacccATTTCAATTACATACTTGGTTATTACATTGTATTCAGCATGTGCAACCAACCATcgttcatttataaaaaataatctaaatttacatataaaaatatactatatatatatatatatatatatatatatatatatatatatatatactgtacaatataatacatacaaacatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220737 False 1229 lncRNA 0.32 2 4058119 4059373
TU220738 False 1150 lncRNA 0.42 3 4055422 4057562
XM_043222818.1 False 2395 mRNA 0.39 5 4054053 4058293
XM_043222819.1 True 2395 mRNA 0.39 6 4053527 4058293

Neighbor

gene id symbol gene type direction distance location
LOC122328148 NA coding upstream 3088 4048181 ~ 4050439 (+)
LOC122327441 LOC107741386 coding upstream 60582 3971398 ~ 3992945 (+)
LOC122327394 NA coding upstream 222860 3821995 ~ 3830667 (+)
LOC122328141 NA coding upstream 240486 3810802 ~ 3813041 (+)
LOC122327419 NA coding upstream 254606 3796756 ~ 3798921 (+)
LOC122327467 NA coding downstream 5095 4064468 ~ 4066492 (+)
LOC122327317 NA coding downstream 35018 4094391 ~ 4112520 (+)
LOC122327474 NA coding downstream 53270 4112643 ~ 4116508 (+)
LOC122327450 NA coding downstream 64658 4124031 ~ 4131031 (+)
LOC122327518 NA coding downstream 80784 4140157 ~ 4144531 (+)
G149219 NA non-coding upstream 9568 4042503 ~ 4043959 (+)
G149211 NA non-coding upstream 13816 3975925 ~ 4039711 (+)
G149214 LOC107694241 non-coding upstream 40692 3996564 ~ 4012835 (+)
G149206 NA non-coding upstream 65810 3961459 ~ 3987717 (+)
G149201 NA non-coding upstream 116602 3936474 ~ 3936925 (+)
G149229 NA non-coding downstream 20270 4079643 ~ 4080215 (+)
G149230 NA non-coding downstream 20910 4080283 ~ 4080827 (+)
G149240 NA non-coding downstream 60158 4119531 ~ 4121608 (+)
LOC122327587 NA non-coding downstream 115836 4175209 ~ 4176848 (+)
G149235 LOC107687330,LOC107690511,LOC107709401 non-coding downstream 127992 4187365 ~ 4188839 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 200156 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 273851 3777580 ~ 3779676 (+)
G148992 NA other upstream 458227 3592661 ~ 3595300 (+)
LOC122327325 NA other upstream 461154 3297362 ~ 3592373 (+)
G149028 NA other upstream 479054 3571093 ~ 3574473 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 153853 4213226 ~ 4240787 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 360190 4419563 ~ 4421001 (+)
LOC122327412 LOC107698560 other downstream 638819 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 653489 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 932638 4992011 ~ 4998974 (+)

Expression


Co-expression Network