LOC122327325


Basic Information

Item Value
gene id LOC122327325
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3297362 ~ 3592373 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220368
TGTTGGCTAGTTTCTATTTGGAATATCTCTCTTATAACGGAATGCCCTCCGAAGTGAAGTCCACCTCCAAGAACACTAACTGTCGACGGAACGCACGGAAGTAACCGCCATTTAAGTCGTTCGCGCTGCTATTGCAGATTTTGGAAACGTCAAACTTAAACGAAGCTCTCATAAATCGTcgtgttaatttatttagtcGTTTCAGCGATTCAGATTTCTCTGTTGTTATTGTGAGCATTGCGTTAGCTGTCTGTCGGGAGGGTGTGGTTCACCGACGAGTATTAATAATATCCATGGAAATCTGATTTGGTTGAAATCGTCAACAATATGACTTTCAAGATATTTCTGTCTTTGTTATTAATGCGCGGGGTGTTTGGTTCTGGAGATGATGAAGTTTTATCAGCGATGGAGGGAGATTCGGTCAATCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAGATGATTTCTCATATACTAATGACAGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACATCAAATGCTAAATTttttgttgctgtctatgAGTCTCCATCCGTTATTGATGTTGGTGAAGCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTAATGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATAGCTAAGAGTGATATAGAGACCAATGGCTTATCTTTAAACACTgatgagagattcagagacagactgcaGCTGAATgatcagactggatctctgaccatcgaGAATATCAAAAACACAGACTCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAG
>TU220369
TGAACGCTTTCGACGTGGAATCTCTCTTATAGCGGAATTCCCTTCGAAGTTCACTTAGAAGTCTACTTACTGTCGAATGGAACGACTCTCCGCCATTAAAGTCGTTCAGATTTAGAAAGCGTAAACAGAGCTCTTCGCGTCCAGCGGCATATAAACGACATATAAAGCTGTTCATAttcatctgttgtttttttgggtgGGTGTGGTTCTCAAACGAGTGAGAATCTGATTTAGATAGAATATTCAACGATATGACTTTGAAGGATATTTCTGTCTTTGTTACTAATGTGCGGGGTGTTTGGTTCAGAAGATGATGAAGAGAAGACATTATCAGCGATGGAGGGAGATTCGTTCAATCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAAATGATTTCTCATATACTAATGACGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACatcaaatgatacattttttgttgctgtctatgAGTCTCCATCCGTTATTGATGTTGGTGAAGCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTAATGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATAGCTAAGAGTGATATAGAGACCAATGGCTTATCTTTAAACACTgatgagagattcagagacagactgcaGCTGAATgatcagactggatctctgaccatcgaGAATATCAAAAACACAGACTCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAG
>TU220371
TGAACGCTTTCGACGTGGAATCTCTCTTATAGCGGAATTCCCTTCGAAGTTCACTTAGAAGTCTACTTACTGTCGAATGGAACGACTCTCCGCCATTAAAGTCGTTCAGATTTAGAAAGCGTAAACAGAGCTCTTCGCGTCCAGCGGCATATAAACGACATATAAAGCTGTTCATAttcatctgttgtttttttgggtgGGTGTGGTTCTCAAACGAGTGAGAATCTGATTTAGATAGAATATTCAACGATATGACTTTGAAGGATATTTCTGTCTTTGTTACTAATGTGCGGGGTGTTTGGTTCTGGAGATGATGAAGTTTTATCAGCGATGGAGGGAGATTCGGTCAATCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAGATGATTTCTCATATACTAATGACAGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACATCAAATGCTAAATTttttgttgctgtctatgAGTCTCCATCCGTTATTGATGTTGGTGAAGCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTAATGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATAGCTAAGAGTGATATAGAGACCAATGGCTTATCTTTAAACACTgatgagagattcagagacagactgcaGCTGAATgatcagactggatctctgaccatcgaGAATATCAAAAACACAGACTCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAG
>XM_043222605.1
CCACAGAGACCTGAACGCTTTCGACGTGGAATCTCTCTTATAGCGGAATTCCCTTCGAAGTTCACTTAGAAGTCTACTTACTGTCGAATGGAACGACTCTCCGCCATTAAAGTCGTTCAGATTTAGAAAGCGTAAACAGAGCTCTTCGCGTCCAGCGGCATATAAACGACATATAAAGCTGTTCATAttcatctgttgtttttttgggtgGGTGTGGTTCTCAAACGAGTGAGAATCTGATTTAGATAGAATATTCAACGATATGACTTTGAAGGATATTTCTGTCTTTGTTACTAATGTGCGGGGTGTTTGGTTCAGAAGATGATGAAGAGAAGACATTATCAGCGATGGAGGGAGATTCGTTCAATCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAAATGATTTCTCATATACTAATGACGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACatcaaatgatacattttttgttgctgtctatgAGTCTCCATCCGTTATTGACGCTGGTGAATCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTACTGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATCGCCAAGAGTGATGTAGAGACCAAGAGTtcaacattatatattactgatgagagattcagagacagactgcaGTTGAATgatcagactggatctctgaccgtcaaggaaatcaaaaacacagactCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAGATTCATTGTTAATGTCGGTGGTTCAGGTGTGTCTTCCGGTGCTGTAGCAGGGATATCGGTTGCTTTCCTGCTGGCGATTTTAATTGTTGCTATTTACTATCGCTGCAAGATCTttaaacttcaaataaaactaaTGACAGATGAAAATAAGAATGTGATAGTAAAGGAGGGAGAAGACGTCACACTTCACACTGACGCTAATATAGAGGCAGAAGATCGGATCCTGTGGACGTTTCAAGCTCTAGGTGCTCGTATCGCTGAAATCAGAGAAGGTACCAGAGAGACATTTGATGGTGGTGATGGGAGATTCACAGACAGACTGATGCTGGATGAGACTGGATCCCTGACCATCAGAAACATCGAGATTAAACACAGTGGAGTCTATATACTACAGATCAAGAAATGTCGCAAGATAAGATGGCCCTCATACAAAAGATTCAAGGTTAAGGTTGATGAGTGGACTACATCGGTGATGGAGGGAGATGATGTCACTCTAAATATTAGTACTGAATTTAACGAAGTTAAGAAGGTAAAGTGGATGTTTGAAGATCAAGGCATGATGGCTCCCATAGCTGAGATCAATGTTGAGACCGGTGAGATCTTTCCGTTGGAGGGTAAAGCTGATGGGAGATTCAGaaacagactgaagctggatcatCTGAtgggatctctgaccatcaagAACACCGGACCTGAGCACTCTGGATACTATCACATCCAGATCAAACACAGTGGAGGGACCTCATTCAGGATGTTGATGGTTTCTGTCAGTGAGAGGAAGATATCGGCGGAGGAGGGAACGAATGTGACTCTAGAGATTGAAACACAGAAGGATGATCAGATTCTGTGGATGTTTGGAGCTGAAGAGACTCTCGTGGCTCAAATCAAAGGAGAGACCAGAGAGACACGTGATGTTCCTGATGAGAGATTCACaaacagactgaagctggaagaatctggatctctgaccatcagaaaCATCACAGCTGAACACACCGGAGCCTATAAAGCACAGATCGTCAGCCGCGGAAGTGTCTCATACAAGAAATTCAAGGTTGTTATGCTTGCGGAGTATGTGCCAGTGAAGAAGGGAGATGCTGTTACGCTACACACTGACTCCAAAACACAGAGAAACGATCAGATacgctggatgtttggagagAAAACTCTCCTCACTGAAATCAAAGAAGGGAGCGGAGAGATCTCTACATATGATGATGTTCTTAacgggagattcagagacagactgaagctggacgaGCGGACCGGATCACTGACCATCACTAACTTCACGACACAACACACTGGACTCTACACGGTGAAGATCAACAGAAGCGCAGAAACCTACAGAAACAagagttttgatgtttttgccaGAGTTTCAGTGATTTCAGAGGAAAAGGAGGTAAATGAAAATGAAGTGAAGTCTGATGGAGATCATCTGAATGTATGAAGACTGAAATCATCAACacagaaatgaagaaatgagCCGTGTCCTTTGGATTTAGATGAACGTACAGATAAAACCCATTTTAATGATGTTATGCTTCACACCTCTTTTAGCTTAGTAGTGGTCAGAAATATCATATagcttttataatatatattttaccacAGCAGTGTTTCTCTAACCACTGTATTTGCTGCtttatgtaataattaacaCTAAAATCTGGTTAATATTCAAGTTTTTCTTTGAGTTCGGATCATGTGTAGAAATTCATCAGACAGTGAGACGATTCAGAAACATCTCTGACCATTAATGACCATCTGACATTTCTCTTCTACTACTaaaatttgtgttattttgcTGTTAAATTGTAAATGCTGTGCATTTTTCTACTGCTGTATTATGTAAGTTAACATAAATGTAATCCGAAAGATATGTTCTGAAGTCAATCAGATGTGAATGTAAAAGTGAATCATGTGTAAATGTGAATTTAGAGTGTCTTTGTAAGAACTTCAGTTAGCCTTTGAGTTTAAAAACTAGTCATATCTGTCATGTTTATCAGTTGAtgtatcaaaactctttggc
>XR_006247633.1
CCACAGAGACCTGAACGCTTTCGACGTGGAATCTCTCTTATAGCGGAATTCCCTTCGAAGTTCACTTAGAAGTCTACTTACTGTCGAATGGAACGACTCTCCGCCATTAAAGTCGTTCAGATTTAGAAAGCGTAAACAGAGCTCTTCGCGTCCAGCGGCATATAAACGACATATAAAGCTGTTCATAttcatctgttgtttttttgggtgGGTGTGGTTCTCAAACGAGTGAGAATCTGATTTAGATAGAATATTCAACGATATGACTTTGAAGGATATTTCTGTCTTTGTTACTAATGTGCGGGGTGTTTGGTTCAGAAGATGATGAAGAGAAGACATTATCAGCGATGGAGGGAGATTCGTTCAATCTAAACATGAATCTTACCCAAGTACAGGGATTTAATCTGATACAGTGGAGGTTTGGAGGTGAAGGATCCAGCATTGCTAGAACCGATGGAAATGATTTCTCATATACTAATGACGAGATATTCAGAGACAGACTACAGCTGaatcagactggatctctgaccatcaagAACATGAGAACCAAACACTCTGGACTTTATAAACTACAGATCGACCACAGCAGTGGGACatcaaatgatacattttttgttgctgtctatgAGTCTCCATCCGTTATTGACGCTGGTGAATCTCAAACAAAGAGCGTGTCTGTGAAAGAGGGAGATTCTGTTACTCTTCAGACTGATGTTACTGAACTACATGGAGATGAGCTGATAGTGTGGAGGTTTGGAGGAGAAGGAAAACTCATCGCCAAGAGTGATGTAGAGACCAAGAGTtcaacattatatattactgatgagagattcagagacagactgcaGTTGAATgatcagactggatctctgaccgtcaaggaaatcaaaaacacagactCCGGACTTTATACAGTGAAGATCAGCAGCAGCGAACAGATGAGAAACAGGAGATTCATTGTTAATGTCGGTGGTTCAGGTGTGTCTTCCGGTGCTGTAGCAGGGATATCGGTTGCTTTCCTGCTGGCGATTTTAATTGTTGCTATTTACTATCGCTGCAAGATCTttaaacttcaaataaaactaaTGACAGATGAAAATAAGAATGTGATAGTAAAGGAGGGAGAAGACGTCACACTTCACACTGACGCTAATATAGAGGCAGAAGATCGGATCCTGTGGACGTTTCAAGCTCTAGGTGCTCGTATCGCTGAAATCAGAGAAGGTACCAGAGAGACATTTGATGGTGGTGATGGGAGATTCACAGACAGACTGATGCTGGATGAGACTGGATCCCTGACCATCAGAAACATCGAGATTAAACACAGTGGAGTCTATATACTACAGATCAAGAAATGTCGCAAGATAAGATGGCCCTCATACAAAAGATTCAAGGTTAAGGTTGATGAGTGGACTACATCGGTGATGGAGGGAGATGATGTCACTCTAAATATTAGTACTGAATTTAACGAAGTTAAGAAGGTAAAGTGGATGTTTGAAGATCAAGGCATGATGGCTCCCATAGCTGAGATCAATGTTGAGACCGGTGAGATCTTTCCGTTGGAGGGTAAAGCTGATGGGAGATTCAGaaacagactgaagctggatcatCTGAtgggatctctgaccatcaagAACACCGGACCTGAGCACTCTGGATACTATCACATCCAGATCAAACACAGTGGAGGGACCTCATTCAGGATGTTGATGGTTTCTGTCAGTGAGAGGAAGATATCGGCGGAGGAGGGAACGAATGTGACTCTAGAGATTGAAACACAGAAGGATGATCAGATTCTGTGGATGTTTGGAGCTGAAGAGACTCTCGTGGCTCAAATCAAAGGAGAGACCAGAGAGACACGTGATGTTCCTGATGAGAGATTCACaaacagactgaagctggaagaatctggatctctgaccatcagaaaCATCACAGCTGAACACACCGGAGCCTATAAAGCACAGATCGTCAGCCGCGGAAGTGTCTCATACAAGAAATTCAAGGTTGTTATGCTTGCGGAGTATGTGCCAGTGAAGAAGGGAGATGCTGTTACGCTACACACTGACTCCAAAACACAGAGAAACGATCAGATacgctggatgtttggagagAAAACTCTCCTCACTGAAATCAAAGAAGGGAGCGGAGAGATCTCTACATATGATGATGTTCTTAacgggagattcagagacagactgaagctggacgaGCGGACCGGATCACTGACCATCACTAACTTCACGACACAACACACTGGACTCTACACGGTGAAGATCAACAGAAGCGCAGAAACCTACAGAAACAagagttttgatgtttttgccaGAGGTGAAATTATTAAAGACCAGACCATTTATTTAGACCAGAACACtgcctttcttcttctctgaaATGCAGCAAActgataaaacagcatttaaaatctTAGAAATTTCAAAGGGCTGTGCAGAATGACAATATATACTGTGACATTCAATATAATTTTCAGTGATTTCAGAGGAAAAGGAGGTAAATGAAAATGAAGTGAAGTCTGATGGAGATCATCTGAATGTATGAAGACTGAAATCATCAACacagaaatgaagaaatgagCCGTGTCCTTTGGATTTAGATGAACGTACAGATAAAACCCATTTTAATGATGTTATGCTTCACACCTCTTTTAGCTTAGTAGTGGTCAGAAATATCATATagcttttataatatatattttaccacAGCAGTGTTTCTCTAACCACTGTATTTGCTGCtttatgtaataattaacaCTAAAATCTGGTTAATATTCAAGTTTTTCTTTGAGTTCGGATCATGTGTAGAAATTCATCAGACAGTGAGACGATTCAGAAACATCTCTGACCATTAATGACCATCTGACATTTCTCTTCTACTACTaaaatttgtgttattttgcTGTTAAATTGTAAATGCTGTGCATTTTTCTACTGCTGTATTATGTAAGTTAACATAAATGTAATCCGAAAGATATGTTCTGAAGTCAATCAGATGTGAATGTAAAAGTGAATCATGTGTAAATGTGAATTTAGAGTGTCTTTGTAAGAACTTCAGTTAGCCTTTGAGTTTAAAAACTAGTCATATCTGTCATGTTTATCAGTTGAtgtatcaaaactctttggc

Function

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220368 False 1008 TUCP 0.42 3 3590639 3592373
TU220369 False 938 TUCP 0.41 3 3297373 3592373
TU220371 False 933 TUCP 0.41 3 3297373 3592373
XM_043222605.1 False 2987 mRNA 0.41 10 3297362 3304754
XR_006247633.1 True 3141 transcript 0.40 11 3297362 3304754

Neighbor

gene id symbol gene type direction distance location
zmp:0000000652 NA coding upstream 7757 3287920 ~ 3289605 (+)
LOC122327483 NA coding upstream 17154 3278181 ~ 3280208 (+)
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding upstream 46733 3245640 ~ 3250629 (+)
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding upstream 100998 3193319 ~ 3196364 (+)
LOC122327485 LOC107718467,LOC107549388,LOC107698584,LOC107702645,LOC107566368 coding upstream 104260 3188402 ~ 3193102 (+)
LOC122328128 NA coding downstream 59697 3652070 ~ 3654665 (+)
LOC122328130 NA coding downstream 135168 3727541 ~ 3729956 (+)
LOC122328133 NA coding downstream 170782 3763155 ~ 3765161 (+)
LOC122327521 LOC107570673,LOC107599107,LOC107698295,LOC107750698,LOC107574907,LOC107575767 coding downstream 172875 3765248 ~ 3766219 (+)
LOC122328139 NA coding downstream 192924 3785297 ~ 3786625 (+)
LOC122327591 NA non-coding upstream 25607 3268123 ~ 3271755 (+)
G148968 NA non-coding upstream 39656 3255462 ~ 3257706 (+)
G148979 NA non-coding upstream 51780 3245141 ~ 3245582 (+)
G148975 NA non-coding upstream 68532 3227704 ~ 3228830 (+)
G148973 NA non-coding upstream 70783 3225209 ~ 3226579 (+)
LOC122327583 NA non-coding downstream 2969 3595342 ~ 3596416 (+)
G149033 NA non-coding downstream 6572 3598945 ~ 3599215 (+)
G149034 NA non-coding downstream 8296 3600669 ~ 3601519 (+)
G149035 NA non-coding downstream 9368 3601741 ~ 3602132 (+)
G149036 NA non-coding downstream 9919 3602292 ~ 3602576 (+)
LOC122327575 NA other upstream 42501 3253738 ~ 3254861 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 58404 3229267 ~ 3238958 (+)
tma7 NA other upstream 72871 3223617 ~ 3224491 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 143781 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 249230 3044638 ~ 3048132 (+)
G148992 NA other downstream 288 3592661 ~ 3595300 (+)
LOC122328138 NA other downstream 185207 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 259690 3852063 ~ 3853371 (+)
LOC122327446 NA other downstream 461154 4053527 ~ 4059373 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 620853 4213226 ~ 4240787 (+)

Expression


Co-expression Network