LOC122328130


Basic Information

Item Value
gene id LOC122328130
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3727541 ~ 3729956 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223840.1
ATGCCTACCGGCGACCGAACACTAGACAATGACGACAAGCCTCGTCAAAAATCGGCACATCTTCAGACATTTACAGCATTCTTAAAGGACGACAAACGGACAGGGAATATGGTTAACGTTTctgttattttctgtttgtgGTTGTCTCGTCTGCTTGatGTGACAGATGCAGTGAAGACGATATCAGTGATGAATGGGCATTTCGTCACTTTAAAACCTGGTGTTACTGAagtacagaaatatttctttatacagTGGATGTTCGAAAGTACAAGAATAGCGGAATTCAACAAGATGAGGCAAACCAGCTCGATCTATGATAGTCCTGatgggagattcagagacaggcTGAAGCTGGATCACaccggatctctgaccatcactaacaccagaaccacagactctggactttatCAACTTACACTTGGCGGCACAGAGACCAGATACCAGAGATTTAACCTTACGGTCCATAATTCTCCACACACTACACCATCAACGGAAAGATGGGCACATTTTGGGACGCTTGCGGTGGACAATTCAACCATCAATCaaactgagaaaaacaacaatactgAGGTTCATCATCAAAGTTCAGaCAAAACCCACTGTTGTGGTCACACCGGCTGTGATCCGATTGGCTCTCTCTCTGCTTTGGTGGGCGTGGCCACTGTTGCTGTGCTGGTTTATGATGTCAGATCCACAAAAAGTGAGCTCAATAGAACAGAAGACACTAGACGTCACCTCCAGACTCTTGTGAAATCAGAGCAGCAGTGTGAATTGAGCGGAACGATAATTTGCGATTATGTTGATATGTTGCCCTGCGGCTGA

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223840.1 True 828 mRNA 0.45 4 3727541 3729956

Neighbor

gene id symbol gene type direction distance location
LOC122328128 NA coding upstream 72876 3652070 ~ 3654665 (+)
LOC122327571 NA coding upstream 360318 3366037 ~ 3367223 (+)
zmp:0000000652 NA coding upstream 437936 3287920 ~ 3289605 (+)
LOC122327483 NA coding upstream 447333 3278181 ~ 3280208 (+)
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding upstream 476912 3245640 ~ 3250629 (+)
LOC122328133 NA coding downstream 33199 3763155 ~ 3765161 (+)
LOC122327521 LOC107570673,LOC107599107,LOC107698295,LOC107750698,LOC107574907,LOC107575767 coding downstream 35292 3765248 ~ 3766219 (+)
LOC122328139 NA coding downstream 55341 3785297 ~ 3786625 (+)
LOC122328140 NA coding downstream 59808 3789764 ~ 3792858 (+)
LOC122327419 NA coding downstream 66800 3796756 ~ 3798921 (+)
G149036 NA non-coding upstream 124965 3602292 ~ 3602576 (+)
G149035 NA non-coding upstream 125409 3601741 ~ 3602132 (+)
G149034 NA non-coding upstream 126022 3600669 ~ 3601519 (+)
G149033 NA non-coding upstream 128326 3598945 ~ 3599215 (+)
LOC122327583 NA non-coding upstream 131125 3595342 ~ 3596416 (+)
G149169 NA non-coding downstream 494 3730450 ~ 3925994 (+)
LOC122327609 NA non-coding downstream 41616 3771572 ~ 3772554 (+)
G149160 NA non-coding downstream 124927 3854883 ~ 3855624 (+)
G149189 NA non-coding downstream 148978 3878934 ~ 3880028 (+)
G149201 NA non-coding downstream 206518 3936474 ~ 3936925 (+)
G148992 NA other upstream 132241 3592661 ~ 3595300 (+)
LOC122327325 NA other upstream 135168 3297362 ~ 3592373 (+)
G149028 NA other upstream 153068 3571093 ~ 3574473 (+)
LOC122327575 NA other upstream 472680 3253738 ~ 3254861 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 488583 3229267 ~ 3238958 (+)
LOC122328138 NA other downstream 47624 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 122107 3852063 ~ 3853371 (+)
LOC122327446 NA other downstream 323571 4053527 ~ 4059373 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 483270 4213226 ~ 4240787 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 689607 4419563 ~ 4421001 (+)

Expression


Co-expression Network