LOC122327575


Basic Information

Item Value
gene id LOC122327575
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3253738 ~ 3254861 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220328
GCGCATGCGCACAAAGCGTTTGCCTGACATTGAGGACGGAGCTGCGTTTCCTCGTAATCCGAATCGGGTTTAAAACAGATCCGTCATGCTCAGCGGGAAGCGCATCGCTGATGTGGGTTACAAGCTCTTCTCGGGCTCCATGATGCTGTTGACGGTGTACGGCGGGTACCTGTGCGTCCTGAGGGCTCAGCGGTACATGCAGAGAAAGAAACAGCTGGATCTGGCAACACAGAACGGGAACGCGTCTTCGGAAACCGTTAAAGACTGAAGACGCTGCTGTAAATGATCACTCAACTGGACACTGATCGCGTCACAGGGGTTGGACAGTATGTGGTCCAGCAGAAAACCACCTGCGTTCATGACCCTCAAAGGGTTTATTTGCCTTTTTGTGGAGTTCTGTGAGGTTTTATgtgttgtaatatattaaatatgcctTGCGAA
>XM_043223029.1
TTCCGCCGCGCCGTACAGTTGCGAGAGTAACTGCGCATGCGCACAAAGCGTTTGCCTGACATTGAGGACGGAGCTGCGTTTCCTCGTAATCCGAATCGGGTTTAAAACAGATCCGTCATGCTCAGCGGGAAGCGCATCGCTGATGTGGGTTACAAGCTCTTCTCGGGCTCCATGATGCTGTTGACGGTGTACGGCGGGTACCTGTGCGTCCTGAGGGCTCAGCGGTACATGCAGAGAAAGAAACAGCTGGATCTGGCAACACAGAACGGGAACGCGTCTTCGGAAACCGTTAAAGACTGAAGACGCTGCTGTAAATGATCACTCAACTGGACACTGATCGCGTCACAGGGGTTGGACAGTATGTGGTCCAGCAGAAAACCACCTGCGTTCATGACCCTCAAAGGGTTTATTTGCCTTTTTGTGGAGTTCTGTGAGGTTTTATgtgttgtaatatattaaatatgcctTGCGAAATCTA

Function

GO: NA

KEGG:

id description
K18181 COX14; cytochrome c oxidase assembly factor 14

RNA

RNA id representative length rna type GC content exon number start site end site
TU220328 False 441 lncRNA 0.51 2 3253770 3254856
XM_043223029.1 True 478 mRNA 0.51 2 3253738 3254861

Neighbor

gene id symbol gene type direction distance location
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding upstream 3109 3245640 ~ 3250629 (+)
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding upstream 57374 3193319 ~ 3196364 (+)
LOC122327485 LOC107718467,LOC107549388,LOC107698584,LOC107702645,LOC107566368 coding upstream 60636 3188402 ~ 3193102 (+)
LOC122327489 LOC107702645,LOC107566368 coding upstream 72834 3175884 ~ 3180904 (+)
LOC122327513 NA coding upstream 86917 3163691 ~ 3166821 (+)
LOC122327483 NA coding downstream 23320 3278181 ~ 3280208 (+)
zmp:0000000652 NA coding downstream 33059 3287920 ~ 3289605 (+)
LOC122327571 NA coding downstream 111176 3366037 ~ 3367223 (+)
LOC122328128 NA coding downstream 397209 3652070 ~ 3654665 (+)
LOC122328130 NA coding downstream 472680 3727541 ~ 3729956 (+)
G148979 NA non-coding upstream 8156 3245141 ~ 3245582 (+)
G148975 NA non-coding upstream 24908 3227704 ~ 3228830 (+)
G148973 NA non-coding upstream 27159 3225209 ~ 3226579 (+)
G148942 LOC107702631,LOC107698575,LOC107549383 non-coding upstream 64584 3183528 ~ 3189154 (+)
G148926 NA non-coding upstream 150835 3102572 ~ 3102903 (+)
G148968 NA non-coding downstream 601 3255462 ~ 3257706 (+)
LOC122327591 NA non-coding downstream 13262 3268123 ~ 3271755 (+)
G148994 NA non-coding downstream 45740 3300601 ~ 3301244 (+)
LOC122327590 NA non-coding downstream 75858 3330719 ~ 3331434 (+)
LOC122327594 NA non-coding downstream 76770 3331631 ~ 3332025 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 14780 3229267 ~ 3238958 (+)
tma7 NA other upstream 29247 3223617 ~ 3224491 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 100157 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 205606 3044638 ~ 3048132 (+)
LOC122327475 NA other upstream 290735 2959100 ~ 2963003 (+)
LOC122327325 NA other downstream 42501 3297362 ~ 3592373 (+)
G149028 NA other downstream 316232 3571093 ~ 3574473 (+)
G148992 NA other downstream 337800 3592661 ~ 3595300 (+)
LOC122328138 NA other downstream 522719 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 597202 3852063 ~ 3853371 (+)

Expression


Co-expression Network