LOC122327483


Basic Information

Item Value
gene id LOC122327483
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3278181 ~ 3280208 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222882.1
aaaaaaaaaaaaggtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgcatgtgtgtatatgtatgtgtgaacTAGGAGGGTCAAGCGaccctcgttttttttttcttttgtcttatTAGAACAGACTTTGCCTCAACGGATGAAGAAAATGTTTCAcctgcttgttttgttttgttcgttGCGTCTGATTGGTGTGTTCAGCGAGTCGGTGTCAGTGATGGAGGGCGATTCTGTCACTTTACACACCGATGTTACTGAAATACATGAAGATGATGATATAGTGTGGAAAGTCGGAGCTGAAAAGTCTCTCATAGCTAAAATGAGTCTAGCTGCTGGAATCTTCTCTATATTTGATGATGTTCTTGACGGGAGATttagagacagactgaagctggacaatcagactggatctctgaccatcacgaaCATCTCAACTAATCACGCCGGCATTTATCAGCTAGATATTAGTGGATTTAAACTGAGATCAAAAACATCCAGAGTTTCTGTCTTGGctcgtCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCAAACTGTTCTTTGTCTTCATCATCTTGTTCATTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGCAGACTCTGTCACACGTGTGAAGTTTTGTTTTCCCCAGAAGTACACATCTTTTGCTGCGGTTTTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCCCTGGTGGGCGTGGCTGCAGTAATTATTCTGGTTTATGACATCAGATCCAGAAGAGGAGGAGACAAGAAGCAGATATCATACATATTATGATACTTCCAGCTCTGTAAAGATGAAATATGTACAaggatttaatttcaaatacagTAATCAACGAGATAATAAGAgcaaataaattgtataaaatgtaatttttgcatttttatatagaattttaGAAGTAAACTCAATTTgagaaaaagtaatttaatgagGCTTAACCAGTGGCTTTAATTTTGATTATTGGCCAATAATGGATGAAAATGGTGCCTGTTCAATGACATTTCAATATCAATCGTTTCATAATATACTTTGGTTAATCGTGTTATTGTCATCATAGAATCTTGTTTATGGTTTAGCCTATAGAGCAATCTGTGATGGTTTTCTGACCTCTAGAGGTACTACAGGATATATGTGAACCAATAGCATGTGACTAATAACAtgacaaatataataatgtatgatCTAATATCAAACGGGGAGTGTTATAATAAAGATAGAAGATCCTGTGAATGTGTGGTTTAATTGGCGGAACCTAAAGCTGCATATTCTTCAATTATTAATGTTCATAACATCAGTATGGAGTGACTACGAGTATAGTATGTATTAGCCTG
>XM_043222883.1
aaaaaaaaaaaaggtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgcatgtgtgtatatgtatgtgtgaacTAGGAGGGTCAAGCGaccctcgttttttttttcttttgtcttatTAGAACAGACTTTGCCTCAACGGATGAAGAAAATGTTTCAcctgcttgttttgttttgttcgttGCGTCTGATTGGTGTGTTCAGCGAGTCGGTGTCAGTGATGGAGGGCGATTCTGTCACTTTACACACCGATGTTACTGAAATACATGAAGATGATGATATAGTGTGGAAAGTCGGAGCTGAAAAGTCTCTCATAGCTAAAATGAGTCTAGCTGCTGGAATCTTCTCTATATTTGATGATGTTCTTGACGGGAGATttagagacagactgaagctggacaatcagactggatctctgaccatcacgaaCATCTCAACTAATCACGCCGGCATTTATCAGCTAGATATTAGTGGATTTAAACTGAGATCAAAAACATCCAGAGTTTCTGTCTTGGctcgtCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCAAACTGTTCTTTGTCTTCATCATCTTGTTCATTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGCAGACTCTGTCACACGTGTGAAGAAGTACACATCTTTTGCTGCGGTTTTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCCCTGGTGGGCGTGGCTGCAGTAATTATTCTGGTTTATGACATCAGATCCAGAAGAGGAGGAGACAAGAAGCAGATATCATACATATTATGATACTTCCAGCTCTGTAAAGATGAAATATGTACAaggatttaatttcaaatacagTAATCAACGAGATAATAAGAgcaaataaattgtataaaatgtaatttttgcatttttatatagaattttaGAAGTAAACTCAATTTgagaaaaagtaatttaatgagGCTTAACCAGTGGCTTTAATTTTGATTATTGGCCAATAATGGATGAAAATGGTGCCTGTTCAATGACATTTCAATATCAATCGTTTCATAATATACTTTGGTTAATCGTGTTATTGTCATCATAGAATCTTGTTTATGGTTTAGCCTATAGAGCAATCTGTGATGGTTTTCTGACCTCTAGAGGTACTACAGGATATATGTGAACCAATAGCATGTGACTAATAACAtgacaaatataataatgtatgatCTAATATCAAACGGGGAGTGTTATAATAAAGATAGAAGATCCTGTGAATGTGTGGTTTAATTGGCGGAACCTAAAGCTGCATATTCTTCAATTATTAATGTTCATAACATCAGTATGGAGTGACTACGAGTATAGTATGTATTA

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222882.1 True 1522 mRNA 0.38 4 3278181 3280208
XM_043222883.1 False 1502 mRNA 0.38 4 3278181 3280203

Neighbor

gene id symbol gene type direction distance location
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding upstream 27552 3245640 ~ 3250629 (+)
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding upstream 81817 3193319 ~ 3196364 (+)
LOC122327485 LOC107718467,LOC107549388,LOC107698584,LOC107702645,LOC107566368 coding upstream 85079 3188402 ~ 3193102 (+)
LOC122327489 LOC107702645,LOC107566368 coding upstream 97277 3175884 ~ 3180904 (+)
LOC122327513 NA coding upstream 111360 3163691 ~ 3166821 (+)
zmp:0000000652 NA coding downstream 7712 3287920 ~ 3289605 (+)
LOC122327571 NA coding downstream 85829 3366037 ~ 3367223 (+)
LOC122328128 NA coding downstream 371862 3652070 ~ 3654665 (+)
LOC122328130 NA coding downstream 447333 3727541 ~ 3729956 (+)
LOC122328133 NA coding downstream 482947 3763155 ~ 3765161 (+)
LOC122327591 NA non-coding upstream 6426 3268123 ~ 3271755 (+)
G148968 NA non-coding upstream 20475 3255462 ~ 3257706 (+)
G148979 NA non-coding upstream 32599 3245141 ~ 3245582 (+)
G148975 NA non-coding upstream 49351 3227704 ~ 3228830 (+)
G148973 NA non-coding upstream 51602 3225209 ~ 3226579 (+)
G148994 NA non-coding downstream 20393 3300601 ~ 3301244 (+)
LOC122327590 NA non-coding downstream 50511 3330719 ~ 3331434 (+)
LOC122327594 NA non-coding downstream 51423 3331631 ~ 3332025 (+)
G149013 NA non-coding downstream 97878 3378086 ~ 3450520 (+)
G149019 NA non-coding downstream 101291 3381499 ~ 3392064 (+)
LOC122327575 NA other upstream 23320 3253738 ~ 3254861 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 39223 3229267 ~ 3238958 (+)
tma7 NA other upstream 53690 3223617 ~ 3224491 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 124600 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 230049 3044638 ~ 3048132 (+)
LOC122327325 NA other downstream 17154 3297362 ~ 3592373 (+)
G149028 NA other downstream 290885 3571093 ~ 3574473 (+)
G148992 NA other downstream 312453 3592661 ~ 3595300 (+)
LOC122328138 NA other downstream 497372 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 571855 3852063 ~ 3853371 (+)

Expression


Co-expression Network