G149013


Basic Information

Item Value
gene id G149013
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3378086 ~ 3450520 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220404
GGTGAGATCAAAGAAGTACAGTCCTGACAAAAGTCTTGTCGCTTATCTATTTTGTAGAAACACCTGCTATTAACCTTGCTATTATTGACTTTTAAGTAATCAATCGGTGTTAGAAATAGCTCGTATGAACAGCTAAAACCCTCCCAAATGATGTttaatgcactgaaataaattagtttCACTGAGAAAagatttatcatttaatcaaaacagaaagGTCAAATTTTGGTAAGACAGAAATTGAACAAATTTACTGcaaatactaaaatatgtcAGCAAATTAAGTAGTGGTGCTGTGAGATCCAAATTTAATATCTTGTATGACTTCCATGAGCTTGAAGGACTGCATCCATGTGGTTTGGCAAGGATTCACACACCTTATTGATGAAGTCATCAGGAATAGCAAAGAAAGCAGTCTTACAAGCCTCCCAGAGTTCAtcaatattttttggtttcgtCTTCCATGCTTCCTCTTTCATCCCACCCCACATATGCTCAATGATGTTCAAGTCTGGTCACAGGGCTGGCCAATCCTGGAGCATCTTGATCTTCTTCGCCCTGAGGAACTTTGATGCGGAGATGGAAGTATGCGATGGAGCACCATCCTGCTGCAGAATTTGGCCTCTTTTATGGTTTGTAATATAAGATGTAGCTAAGATTTCTTGATATTTTAGACTATTGATGTTGCCTTCCACCCTGCAGATCTCTTGTACACCCCCATACTGGATGTAACCCCAGACCGTGATTTTTCCGCCACCAAACTTCACTGTTTTCTGGGTGAATCTCGGATCCATGCGGGCTCCAGTATGTCTCCTGCAATATTTGCGTGACTGTGGTGTAATTCAACAGAAGATTCATCTGAAAATCCACATTCTGACACTTTTTCCAGCGTCCATCCTTTTAGCAGGCTGTGGGCCTTGGCAAATGCCACACGGTTTTTCAATTGTCTTTTGTTGAGTGCTGGCTTCTGGGCACTGATTCGA
>TU220406
GGTGAGATCAAAGAAGTACAGTCCTGACAAAAGTCTTGTCGCTTATCTATTTTGTAGAAACACCTGCTATTAACCTTGCTATTATTGACTTTTAAGTAATCAATCGGTGTTAGAAATAGCTCGTATGAACAGCTAAAACCCTCCCAAATGATGTttaatgcactgaaataaattagtttCACTGAGAAAagatttatcatttaatcaaaacagaaagGTCAAATTTTGGTAAGACAGAAATTGAACAAATTTACTGcaaatactaaaatatgtcAGCAAATTAAGTAGTGGTGCTGTGAGATCCAAATTTAATATCTTGTATGACTTCCATGAGCTTGAAGGACTGCATCCATGTGGTTTGGCAAGGATTCACACACCTTATTGATGAAGTCATCAGGAATAGCAAAGAAAGCAGTCTTACAAGCCTCCCAGAGTTCAtcaatattttttggtttcgtCTTCCATGCTTCCTCTTTCATCCCACCCCACATATGCTCAATGATGTTCAAGTCTGGTCACAGGGCTGGCCAATCCTGGAGCATCTTGATCTTCTTCGCCCTGAGGAACTTTGATGCGGAGATGGAAGTATGCGATGGAGCACCATCCTGCTGCAGAATTTGGCCTCTTTTATGGTTTGTAATATAAGATGTAGCTAAGATTTCTTGATATTTTAGACTATTGATGTTGCCTTCCACCCTGCAGATCTCTTGTACACCCCCATACTGGATGTAACCCCAGACCATGATTTTTCCGCCACCAAACTTCACTGTTTTCTGGGTGAATCTCGGATCCATGCGGGCTCCAGTAGGTCTCCTGCAATATTTGCGGTGACTGTGGTGTAATTCAACAGAAGATTCATCTGAAAAATCCACCTTCTGACACTTTTTCCAGCGTCCATCCTTTTAGCAGGCTGTGGGCCTTGGCAAATGCCACACGGTTTTTCAATTGTCTTTTGTTGAGTGCTGGCTTCTGGGCACTGATTCGACGATGGAGGCCATTTCGAGATAGAATCCGACAAACTGTTCTGGTTGACATGGGGACTTCAGGTGACCAGGTCTTGTGGAGCTCTGCTGCAGTGGAAAATGAGCTGGCCTTGGATTTTCGAGCCAACAAAAGGTCCTCTCGAGCAGTTGTCTTGCGGGGTCTGCCTGACCTGGGCTTGTCAAAAACGTCTCCAGTCtcttcaaattttttttttcctctgtactTGACACTGAGACACATTGAAGGTGTCTGCCACATCAGCAGTGGATCTGGTCTTCAGCCTCTTGATAATCAACACTTTAGTCTCAGGGTGAATCTTAGGCATGTTTGCAGAGGTCTAGTTGCACTTGATGTGAAGGTCTAGTATACTGGGGTTCTTTTTATACACACCTGAGACCTAATTGATCCATTCTTAGTCACAGGTGAAGCTCATATGACAAGGCGACAACACTTATGTCTTTGCAAAAATTGACTCAATGGGCTTTACCAAGCTGTGAATATTAGAATACTTTTTGACAGTTTCGTTTTGcactgaaacattattacaaaagcTGTTGGGATTAAAATGAGccatttcttgtaaaaaaatcttgattagaaatatatttcagcaGCACTTCAGGTCAATTCGTACACAAGCGACAAGACTTTTGTCAGGGACTGTAAGcgataacaggcagaaggtcggtaggcaggcagagaacaatcagagAACAGGGAATCAAACACGGGGATGAACGCTCAGAATTGCAGCCGGAACTAACAAGACTTCGCCGTGAGTGTTTGAGAGGAAGTTCCTTATATAGGGTGTGGTGATGGGAAACACCTGGCAGGgctaatcagcccaaggcacgGGGTTATGTGAAACTGAGTCCGTGACGATCAGTATtcgggtgagggctccctccggtggcggttggagagagccacagaggtgctgtttgtGACAAGGATGTACTAGACAAATTTGTCTCTTCATTAATAGGACCATCTGCGCCCTCTTTGTCCTTTCTCTTCTAAATTGAgggaagagaaaacaaacagacaaacaaaaacaagtgagaagagaaaaagagtcTGAACTCATCACATAACACTGATGAAGCACTGTAAtaagtgtttaataaattaattattgaagTAACAAATATAACATGGTTTTGGttaattgctaaataatttaCCCACGTTTGaccaataatttaataaaaactgttgtaCAGAGGACTATAGCAAacctaaaagaaaataatgggTGAATTATTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220404 False 983 lncRNA 0.41 2 3378086 3450520
TU220406 True 2252 lncRNA 0.42 2 3378086 3380359

Neighbor

gene id symbol gene type direction distance location
LOC122327571 NA coding upstream 10863 3366037 ~ 3367223 (+)
zmp:0000000652 NA coding upstream 88481 3287920 ~ 3289605 (+)
LOC122327483 NA coding upstream 97878 3278181 ~ 3280208 (+)
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding upstream 127457 3245640 ~ 3250629 (+)
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding upstream 181722 3193319 ~ 3196364 (+)
LOC122328128 NA coding downstream 201550 3652070 ~ 3654665 (+)
LOC122328130 NA coding downstream 277021 3727541 ~ 3729956 (+)
LOC122328133 NA coding downstream 312635 3763155 ~ 3765161 (+)
LOC122327521 LOC107570673,LOC107599107,LOC107698295,LOC107750698,LOC107574907,LOC107575767 coding downstream 314728 3765248 ~ 3766219 (+)
LOC122328139 NA coding downstream 334777 3785297 ~ 3786625 (+)
LOC122327594 NA non-coding upstream 46061 3331631 ~ 3332025 (+)
LOC122327590 NA non-coding upstream 46652 3330719 ~ 3331434 (+)
G148994 NA non-coding upstream 76842 3300601 ~ 3301244 (+)
LOC122327591 NA non-coding upstream 106331 3268123 ~ 3271755 (+)
G148968 NA non-coding upstream 120380 3255462 ~ 3257706 (+)
LOC122327599 NA non-coding downstream 83501 3534021 ~ 3544542 (+)
G149023 NA non-coding downstream 85613 3536133 ~ 3538670 (+)
LOC122327585 NA non-coding downstream 98259 3548779 ~ 3551200 (+)
LOC122327584 NA non-coding downstream 105021 3555541 ~ 3563392 (+)
LOC122327598 NA non-coding downstream 119779 3570299 ~ 3572142 (+)
LOC122327575 NA other upstream 123225 3253738 ~ 3254861 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 139128 3229267 ~ 3238958 (+)
tma7 NA other upstream 153595 3223617 ~ 3224491 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 224505 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 329954 3044638 ~ 3048132 (+)
G149028 NA other downstream 120573 3571093 ~ 3574473 (+)
G148992 NA other downstream 142141 3592661 ~ 3595300 (+)
LOC122328138 NA other downstream 327060 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 401543 3852063 ~ 3853371 (+)
LOC122327446 NA other downstream 603007 4053527 ~ 4059373 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033739 NA non-coding NC_007118.7 CM002891.2 26199414 ~ 26213850 (+)