LOC122327521 (LOC107570673,LOC107599107,LOC107698295,LOC107750698,LOC107574907,LOC107575767)


Basic Information

Item Value
gene id LOC122327521
gene name LOC107570673,LOC107599107,LOC107698295,LOC107750698,LOC107574907,LOC107575767
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3765248 ~ 3766219 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222943.1
CAGAAATTTGAAGAAATGAAGAGGAGAATCCATTCGTTAGAGACGTGGTTTCAGACACAAGaTTCAGGAACTAGAGAAGATGAACTGAGGATTGTACTCCTCGGAAAAACTGGGGTTGGGAAGAGTTCAACTGGAAACACCATCTTAGGAAGAGAAGCGTATATATCAGACCTTTCTGGAAGTTCTGTTACTAAAGTGTGTCAGAAAGAGACAGATGAAATCAACAGCAGACACATTACTGTGATTGATACTCCTGGACTTTTTGACACTGAACTCAGTAACGAAGAAATTCAGAGAGAAATCAGAAATTGCATCTCCATGATCCTGCCTGGACCACATGTGTTTCTCTTAATGATTCCTCTGGGAAGATTCACTCAAGAGGAAGAAAAAGCGGTAAAGATCATCCGAGACACGTTTGGAGAAAACTCATTAATGTACACCATAGTGCTGTTTACCAACGGAGACCAACTGAAGAACAAAAGCATCGAACAGTTCCTGGAAAACTCTGGGATTGCTCTTAAAAACCTCATTGCTGAGTGTGGAAACAGATACCATGTGTTCAATAATGAGAGCAAAGACCGGACACAGGTGAATGATCTACTGCAGAAGATAGATGAAATGGTGAAAGCAAACGGAGGGAGTTACTACTCATGCAAGATGTTCagagagatggaaagagaaatacaagagaaacaaaagaagatacTGACTGAGAAAGCGGAGAACCTgaacagagaaaaagaagaattgATGAAGAAACATAAAGAGTAGAAAAGAAAGTTGAAGACTAAGATGGAGGAAGAGcataacaaagagaaaaagagaag

Function

NR:

description
PREDICTED: GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222943.1 True 827 mRNA 0.40 2 3765248 3766219

Neighbor

gene id symbol gene type direction distance location
LOC122328133 NA coding upstream 87 3763155 ~ 3765161 (+)
LOC122328130 NA coding upstream 35292 3727541 ~ 3729956 (+)
LOC122328128 NA coding upstream 110583 3652070 ~ 3654665 (+)
LOC122327571 NA coding upstream 398025 3366037 ~ 3367223 (+)
zmp:0000000652 NA coding upstream 475643 3287920 ~ 3289605 (+)
LOC122328139 NA coding downstream 19078 3785297 ~ 3786625 (+)
LOC122328140 NA coding downstream 23545 3789764 ~ 3792858 (+)
LOC122327419 NA coding downstream 30537 3796756 ~ 3798921 (+)
LOC122328141 NA coding downstream 44583 3810802 ~ 3813041 (+)
LOC122327394 NA coding downstream 55776 3821995 ~ 3830667 (+)
G149036 NA non-coding upstream 162672 3602292 ~ 3602576 (+)
G149035 NA non-coding upstream 163116 3601741 ~ 3602132 (+)
G149034 NA non-coding upstream 163729 3600669 ~ 3601519 (+)
G149033 NA non-coding upstream 166033 3598945 ~ 3599215 (+)
LOC122327583 NA non-coding upstream 168832 3595342 ~ 3596416 (+)
LOC122327609 NA non-coding downstream 5353 3771572 ~ 3772554 (+)
G149160 NA non-coding downstream 88664 3854883 ~ 3855624 (+)
G149189 NA non-coding downstream 112715 3878934 ~ 3880028 (+)
G149201 NA non-coding downstream 170255 3936474 ~ 3936925 (+)
G149206 NA non-coding downstream 195240 3961459 ~ 3987717 (+)
G148992 NA other upstream 169948 3592661 ~ 3595300 (+)
LOC122327325 NA other upstream 172875 3297362 ~ 3592373 (+)
G149028 NA other upstream 190775 3571093 ~ 3574473 (+)
LOC122327575 NA other upstream 510387 3253738 ~ 3254861 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 526290 3229267 ~ 3238958 (+)
LOC122328138 NA other downstream 11361 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 85844 3852063 ~ 3853371 (+)
LOC122327446 NA other downstream 287308 4053527 ~ 4059373 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 447007 4213226 ~ 4240787 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 653344 4419563 ~ 4421001 (+)

Expression


Co-expression Network