LOC122327590


Basic Information

Item Value
gene id LOC122327590
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3330719 ~ 3331434 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247669.1
TAATGATTTCACATTCCAAGATTTTCTCACTGAAGGTAAGTAGttaaaagcaAATTTGGGTTTGCAAGCTCTGCAGCTCTTCAAGTCTTTGATGACACAGACACCAATGTGGAGGAGGACATCTTCCAAGAACTGATTGAAGCCAATCCACATTTatgtttaactgttaaatgtCTGGAAGAACTTTCTGCTGGCCTGCCAGAGGTGAATACACCAACAAGATCCTCGACCCCCAGCACATGCACTGATACTCTTTCAGTCTCTTCAGCTGACTATGATGAGGCAGACATAGCAGTGAACAGGCAGTCTCCACGGGCTTGCAGCAGAGAGACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247669.1 True 335 lncRNA 0.44 3 3330719 3331434

Neighbor

gene id symbol gene type direction distance location
zmp:0000000652 NA coding upstream 41114 3287920 ~ 3289605 (+)
LOC122327483 NA coding upstream 50511 3278181 ~ 3280208 (+)
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding upstream 80090 3245640 ~ 3250629 (+)
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding upstream 134355 3193319 ~ 3196364 (+)
LOC122327485 LOC107718467,LOC107549388,LOC107698584,LOC107702645,LOC107566368 coding upstream 137617 3188402 ~ 3193102 (+)
LOC122327571 NA coding downstream 34603 3366037 ~ 3367223 (+)
LOC122328128 NA coding downstream 320636 3652070 ~ 3654665 (+)
LOC122328130 NA coding downstream 396107 3727541 ~ 3729956 (+)
LOC122328133 NA coding downstream 431721 3763155 ~ 3765161 (+)
LOC122327521 LOC107570673,LOC107599107,LOC107698295,LOC107750698,LOC107574907,LOC107575767 coding downstream 433814 3765248 ~ 3766219 (+)
G148994 NA non-coding upstream 29475 3300601 ~ 3301244 (+)
LOC122327591 NA non-coding upstream 58964 3268123 ~ 3271755 (+)
G148968 NA non-coding upstream 73013 3255462 ~ 3257706 (+)
G148979 NA non-coding upstream 85137 3245141 ~ 3245582 (+)
G148975 NA non-coding upstream 101889 3227704 ~ 3228830 (+)
LOC122327594 NA non-coding downstream 197 3331631 ~ 3332025 (+)
G149013 NA non-coding downstream 46652 3378086 ~ 3450520 (+)
G149019 NA non-coding downstream 50065 3381499 ~ 3392064 (+)
G149016 NA non-coding downstream 54240 3385674 ~ 3415304 (+)
G149012 NA non-coding downstream 56810 3388244 ~ 3449153 (+)
LOC122327575 NA other upstream 75858 3253738 ~ 3254861 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 91761 3229267 ~ 3238958 (+)
tma7 NA other upstream 106228 3223617 ~ 3224491 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 177138 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 282587 3044638 ~ 3048132 (+)
G149028 NA other downstream 239659 3571093 ~ 3574473 (+)
G148992 NA other downstream 261227 3592661 ~ 3595300 (+)
LOC122328138 NA other downstream 446146 3777580 ~ 3779676 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other downstream 520629 3852063 ~ 3853371 (+)
LOC122327446 NA other downstream 722093 4053527 ~ 4059373 (+)

Expression


Co-expression Network