G148979


Basic Information

Item Value
gene id G148979
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3245141 ~ 3245582 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220346
CAACAAAGCAAGCAAAAAGAAGTCTTACCAGTAGGTGGAGCTCTTATGTCTCTTATCATGACAActgatggaaaataaaacagcatgatTTTGGTGCATAGCAGTAGAATGTTTTTGCTATTTGAAATGCTTGGCATAAGTGCAAAAAAGTTCTCTGtcaaatgtgaccctggagcacaaaagctgtaaaaaataacaaaagtaaagatcatgttccactaatatatttaataaatttcctACCCTAAATaccaaaacttaatttttgtatctcggccaaatattgtcctatcctaacaaacatccatggaaagcttatttagtgtttattaatcttaattttataaaCTCTTATGACTGGTTATGTACTCAATATATTTGGTTAgcatattgttgttgttttttagaaCTGCCATCTTGCCAAAACTAGGTAGCTACTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220346 True 442 lncRNA 0.32 1 3245141 3245582

Neighbor

gene id symbol gene type direction distance location
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding upstream 48777 3193319 ~ 3196364 (+)
LOC122327485 LOC107718467,LOC107549388,LOC107698584,LOC107702645,LOC107566368 coding upstream 52039 3188402 ~ 3193102 (+)
LOC122327489 LOC107702645,LOC107566368 coding upstream 64237 3175884 ~ 3180904 (+)
LOC122327513 NA coding upstream 78320 3163691 ~ 3166821 (+)
cers1 cers1,LOC107702637,LOC107566364,LOC107698599,LOC107733357 coding upstream 165226 3066926 ~ 3079915 (+)
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding downstream 58 3245640 ~ 3250629 (+)
LOC122327483 NA coding downstream 32599 3278181 ~ 3280208 (+)
zmp:0000000652 NA coding downstream 42338 3287920 ~ 3289605 (+)
LOC122327571 NA coding downstream 120455 3366037 ~ 3367223 (+)
LOC122328128 NA coding downstream 406488 3652070 ~ 3654665 (+)
G148975 NA non-coding upstream 16311 3227704 ~ 3228830 (+)
G148973 NA non-coding upstream 18562 3225209 ~ 3226579 (+)
G148942 LOC107702631,LOC107698575,LOC107549383 non-coding upstream 55987 3183528 ~ 3189154 (+)
G148926 NA non-coding upstream 142238 3102572 ~ 3102903 (+)
G148830 NA non-coding upstream 252729 2990285 ~ 2992412 (+)
G148968 NA non-coding downstream 9880 3255462 ~ 3257706 (+)
LOC122327591 NA non-coding downstream 22541 3268123 ~ 3271755 (+)
G148994 NA non-coding downstream 55019 3300601 ~ 3301244 (+)
LOC122327590 NA non-coding downstream 85137 3330719 ~ 3331434 (+)
LOC122327594 NA non-coding downstream 86049 3331631 ~ 3332025 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other upstream 6183 3229267 ~ 3238958 (+)
tma7 NA other upstream 20650 3223617 ~ 3224491 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 91560 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 197009 3044638 ~ 3048132 (+)
LOC122327475 NA other upstream 282138 2959100 ~ 2963003 (+)
LOC122327575 NA other downstream 8156 3253738 ~ 3254861 (+)
LOC122327325 NA other downstream 51780 3297362 ~ 3592373 (+)
G149028 NA other downstream 325511 3571093 ~ 3574473 (+)
G148992 NA other downstream 347079 3592661 ~ 3595300 (+)
LOC122328138 NA other downstream 531998 3777580 ~ 3779676 (+)

Expression


Co-expression Network