G148830


Basic Information

Item Value
gene id G148830
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2990285 ~ 2992412 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220073
GGTTTTGCACATATCTGTAATGGAAACACGCCTACTGTAGTGTTTGTAGACTGTAGAGAAGAAATTTACATTTGCTTTTAGTTCTGATCAAAATGACTAATTAGTGCTAAAAACCACTTCTGTTTAGAACAAATTACCGGCCCATTTGAGCACCACTTCTGGATAAAGAGATTGATTTTAtcagctgtaaaaaaatactctaccttttctttttttaatagcacTCTAAACACCGACAGACTGGTACAATCAGCAAGGCTAACAGCAGAAATCCCAATGTTATAAGCAGTATCCAAAATTCATGCCGGCGGAGTTCTGTAATGATGGAAGCAAAAACGTTCTTAGTGTAGAGGCACTTGTAGTATTTATCAGGCCAGAGATACTACAAAAGTGATGTACCTGAACATGTCAGACAGAGTTCAGTGAGTCGTTTAGACCGGTTTGTGAATGAATATGCCACGACACAGCTGTAGGAATCATCCAGACACTCCACCTCCAGAGGAACAGAGAGACTCGTGCTGAGATCAGACACGAACAATAAACggtttcctttgtaccaggagagagtccCATGACCCACGTTCACCACCGAACACAGCAGGAGGCATTTAGGACCCGATGAACATCCGGATGAGGATGAAGAACAACGCGAATCGTCTCTGCTGATAACGGGAATAGGAAGAGGAACTGCAAAACATGAGAAAAACATTGAATCTCTTCAGTGAGACTTTTGAACTCGGCCTGGTGATCTGCAGCTGGTAGAGTCCAGCGTGTTCAGATCTGATGTTTCTGATGGTCAGAGACCCGGTTTGATTGTCCATATGTAGCTTCTCTTTGAATATCCAATCGTCGAGGACAAAAACGAAGCATTCCATTTGAATTATTTCGGCTATTTGCGCACTCTGAGGTCCAAATGTCCATAGGATATGATCTTCTTTCTGTACTTTAACATCTGTGTTCAAGGTGACAGAATCTCCCTCGATCACCGAAACTCCATGTGTCTCAATAGCGAGAC
>TU220076
CTTTAATAACTTGACGTTAATTCCACCATCATATTTTGTTACAACACAGAAACAGAACGTAAAAACTAtatacaaacagaaataaaacactgtCTTACACACAATTCCAAGgacaaataatacaaacattagTAGtgtttttggatcatttttaaccaaaaaaatgctttaagtAGGAGAATTTGAATTTCGAAGTGCATATTAATACCTGTCTTGTGGGTCTGGTATGAACCCACAATTATACAGAAAGCAATTTCTTGCTTAGCTCCCTGAAAGAATGAAATCTTCCATAAAACACAGAGGCTGGTTTCAATCATTGTTCTGTTTGAAGATGCACGACCGTAATAGTTTTCCTCTGAATGAATGGTTAGTCAAATCCAGACAACAAATGCAGCAATGAGAGAGTTTATCAGTGTTGCATGTCAGTCAAGTGTATTGTTTCCTTTGTCCCATTAGCTTTCtttctttttttaatagcacTCTAAACACCGACAGACTGGTACAATCAGCAAGGCTAACAGCAGAAATCCCAATGTTATAAGCAGTATCCAAAATTCATGCCGGCGGAGTTCTGTAATGATGGAAGCAAAAACGTTCTTAGTGTAGAGGCACTTGTAGTATTTATCAGGCCAGAGATACTACAAAAGTGATGTACCTGAACATGTCAGACAGAGTTCAGTGAGTCGTTTAGACCGGTTTGTGAATGAATATGCCACGACACAGCTGTAGGAATCATCCAGACACTCCACCTCCAGAGGAACAGAGAGACTCGTGCTGAGATCAGACACGAACAATAAACggtttcctttgtaccaggagagagtccCATGACCCACGTTCACCACCGAACACAGCAGGAGGCATTTAGGACCCGATGAACATCCGGATGAGGATGAAGAACAACGCGAATCGTCTCTGCTGATAACGGGAATAGGAAGAGGAACTGCAAAACATGAGAAAAACATTGAATCTCTTCAGTGAGACTTTTGAACTCGGCCTGGTGATCTGCAGCTGGTAGAGTCCAGCGTGTTCAGATCTGATGTTTCTGATGGTCAGAGACCCGGTTTGATTGTCCATATGTAGCTTCTCTTTGAATATCCAATCGTCGAGGACAAAAACGAAGCATTCCATTTGAATTATTTCGGCTATTTGCGCACTCTGAGGTCCAAATGTCCATAGGATATGATCTTCTTTCTGTACTTTAACATCTGTGTTCAAGGTGACAGAATCTCCCTCGATCACCGAAACTCCATGTGTCTCAATAGCGAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220073 False 1015 lncRNA 0.42 2 2991299 2992412
TU220076 True 1271 lncRNA 0.41 3 2990285 2992412

Neighbor

gene id symbol gene type direction distance location
c22h19orf44 NA coding upstream 12703 2968495 ~ 2977582 (+)
cers4a cers4a,LOC107561597,LOC107717160 coding upstream 114369 2868088 ~ 2875916 (+)
LOC122327634 ctxn1,LOC108441290,LOC106573568 coding upstream 205755 2770754 ~ 2784530 (+)
timm44 timm44,LOC107561596,LOC107660209,LOC107704494,LOC108441293 coding upstream 230848 2752641 ~ 2759437 (+)
ticam1 NA coding upstream 238033 2749251 ~ 2752252 (+)
atcaya atcaya,LOC107698602,LOC107727562,LOC107702639,LOC108430235 coding downstream 42646 3035058 ~ 3040559 (+)
LOC122327553 mibp,LOC107566367,LOC107702642,LOC107727561,LOC107734093,LOC107698603,LOC107549391 coding downstream 49104 3041516 ~ 3044491 (+)
mydgf mydgf,LOC107727555,LOC107702644,LOC107733317,LOC107698601,LOC107549393,LOC566052,LOC107566370 coding downstream 56713 3049125 ~ 3052719 (+)
cers1 cers1,LOC107702637,LOC107566364,LOC107698599,LOC107733357 coding downstream 74514 3066926 ~ 3079915 (+)
LOC122327513 NA coding downstream 171279 3163691 ~ 3166821 (+)
LOC122327636 NA non-coding upstream 134201 2806603 ~ 2856084 (+)
G148781 fbn2b,ctxn1,LOC107549363,LOC107742800,LOC107704489,LOC108441290,LOC106573568 non-coding upstream 152336 2770775 ~ 2837949 (+)
G148742 NA non-coding upstream 471143 2518930 ~ 2519142 (+)
G148452 NA non-coding upstream 649874 2338819 ~ 2340411 (+)
G148406 NA non-coding upstream 837109 2151775 ~ 2153176 (+)
G148926 NA non-coding downstream 110160 3102572 ~ 3102903 (+)
G148942 LOC107702631,LOC107698575,LOC107549383 non-coding downstream 191116 3183528 ~ 3189154 (+)
G148973 NA non-coding downstream 232797 3225209 ~ 3226579 (+)
G148975 NA non-coding downstream 235292 3227704 ~ 3228830 (+)
G148979 NA non-coding downstream 252729 3245141 ~ 3245582 (+)
LOC122327475 NA other upstream 27282 2959100 ~ 2963003 (+)
G148388 NA other upstream 844725 2143885 ~ 2145560 (+)
LOC122328040 NA other upstream 1109402 1621992 ~ 1880883 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other downstream 52226 3044638 ~ 3048132 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other downstream 121789 3114201 ~ 3153581 (+)
tma7 NA other downstream 231205 3223617 ~ 3224491 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other downstream 236855 3229267 ~ 3238958 (+)
LOC122327575 NA other downstream 261326 3253738 ~ 3254861 (+)

Expression


Co-expression Network