ticam1


Basic Information

Item Value
gene id ticam1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2749251 ~ 2752252 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223906.1
TACTGCCATCTTCTGGTCCCAAAAGTCCCAAAGAAGTGTTGACTTTGTTCCGCATTACAAGAGAAAGCGAGAAGACAGACGTTCGGACTCGAAAACATCCATGCGTTTTAGATGTAAAACGACCGTTCCTGCTTCTGAATGAATGCAGAACTGTTACAAAGCATTCAGGAGCTCACGTTCGTCTGAACGCCTTCGGATCGAATGGAATGGCTTGAACATGTCGTGTGAGAGCGCACGTTCGCGTATGATCGTCCGCATTTGCGTTAACGATGGCAGCAGAGCTCGTGGATCAAGGATTCGCGAATCTCGCCAAGGCGTTCGAGGTCATTTCCCAGGCCGGCCAGGATCGCTGGGTCAGCCTGACATTCAAAAGGGCCGACACGCGGGCCGAGGAGATGGTGAATGTCATGTGCTTGATTCTCCTCAAGAAGATCGGAGAGGCGCATGCTAAGCTAGCGGCTAACGTCGACAGCAGCATCGGAAAATACTTAGCCGAATTGGTCAAAACGCACGGAGAACGCGTGAGCAGCAGCCACATTGGCGCTTTTAAGTCAACAGACGCCGATACGTTGTTGGATATCGCGAGAATTTTCGCCGTTCTGGTGCAGGAGAGGTTGTGCGACAAGTTGCTACGAGACCGGGCGTACCGCGAAGCTCTTGCGTCAAGCAGAAAGGCTGGTTTGCTATCTTTAGACGTCGAGGAGGAAGTAAAGCAGGTCTGCGGGCCTGACGTTATCGACGAATCCAACACCGAACTCCCTACCGAAACGCTCAATTTATCCTCGCTTCGTCAAAACAGCGGACCCGCGCCAAGTTCGCATTACAGTATCGAAATAAGCTTGCCAACTGCTCCAGAATCCAGTATGGAAGAATCGAAGCCGACGAGTCTACGAACGCCAACAGATGGTGAAGCCACAAACGATCAAGTCCAGCTACGGCATATTTGCGCAAAGGACCGGCGACCGACAGCGGAAGCCAATGATGCGACGAAGTCGAAGCGAGACGAATCTAGCTCCCAACTCGTAACATCCAAAAACACGGATCTCAGATTTTCATCCATCCCGAACGACGACGAGAAGCTTCGAGCTCGACGGCTAAGTGATAACGATCGCAAACTGCCAACGCAACCAATCGGCGACGCAGAAGAAGTGTTTTACGACTTCGTGATCCTGCACGAAGCCGAAGACGCCGACGAGGCCCAAAGGCTCAGGGACAAACTCGAACGTATGACTTCTGGAGTGGGTGCAACGTTTTCCGACGACTTCGCGCAACCAGGAATGTCGACGTTGCGATGCATAGAGGACGCCATCGAGGACTCCGCGTtcgtgctgctgctgctcaccCGGAACTTCGGCTCCAGCCTCAGCGCGACTAGCGCAGATTCGGCGATCGTGAATTCGTTGGAAAACCACCACAAAATGAACTCGGTGATTCCGCTGCTGCCTCGCAATAACTGTTTGCCGCGCCAACGTTTTCCGCTGGTGCTTCAGACGAAGGTCCCTCTCGATGAGAGCAGCAGAATGTTCGAACGCAGCGCCCGAAAGGCCATCTCATCGGAGAAAGTCGCGACTCAGAAGAAGATCTGGACGAGGAAACGGCTTCGTGCTAAAATAGTAGAGGAGCAGAAGAGACTACAAGAGGAGAACGCTGCGAACGTGGAGCTGCAACGAGAGAAGGAAAAATTAGCGCGACTGAGGCTGGAAAGCGAAGTGCAGCAAAATTACGCATTTTATCCGCCATCTGCCCCTCCGTCGCATGGAGcgatgcagcagcagcagcagcagccgcaGTGCATCCACATCGAGAACGCACAAAATATCATGATCGGAAATCACTCGACGATGAATATCGACCATGCCAAAAATTTGGCAGATCAGTTTGATTCATAAACCTggtgtgtgttttcacaaaaacaggTGTTGTGAGAAATCACGCGTGCCTCTGGGAACTGTtgtttcagccaatcagaacactgTCAATCTTTTGTTGAATTGTCAGGTTCGCTAACATCCGGTTGGTTGATGTGCTTTTGGGGGCGGGGTTGGAAGAAGGCCTgataaattttatattgttgtatCAATTATGGTGGTTTATAGTtctctattttatatatatatatatatatatatacacatttattattacattttgcttaaaaagTCCATCAACAAAACCCATAAGAAAaccatcaaagaaaaaaaaaagaaagcaaaatgtCTAATATGTTACCGTAaggaaaaaggtaaaaatataataaaatataatatataatataaatatataataaaattatatttgccAATTGACAGCAAGGTAGGtgtttgcactttttttgtgttgtattaatgacaaaacaattCTAAATTATTCTGTATTACTGTGCTTGAagggaaatattttaatttttaataaaaataattctgtaaaA
>XM_043223907.1
CCCAAAAGTCCCAAAGAAGTGTTGACTTTGTTCCGCATTACAAGAGAAAGCGAGAAGACAGACGTTCGGACTCGAAAACATCCATGCGTTTTAGATGTAAAACGACCGGTACCATAAGCCTCTTTATGTTTCATAATCAGTccgggtttttttttacatgttcgCAGTTTCCTCAGTTAAAGTCTGTTGAATTTCTGTTTTCCAGTTCCTGCTTCTGAATGAATGCAGAACTGTTACAAAGCATTCAGGAGCTCACGTTCGTCTGAACGCCTTCGGATCGAATGGAATGGCTTGAACATGTCGTGTGAGAGCGCACGTTCGCGTATGATCGTCCGCATTTGCGTTAACGATGGCAGCAGAGCTCGTGGATCAAGGATTCGCGAATCTCGCCAAGGCGTTCGAGGTCATTTCCCAGGCCGGCCAGGATCGCTGGGTCAGCCTGACATTCAAAAGGGCCGACACGCGGGCCGAGGAGATGGTGAATGTCATGTGCTTGATTCTCCTCAAGAAGATCGGAGAGGCGCATGCTAAGCTAGCGGCTAACGTCGACAGCAGCATCGGAAAATACTTAGCCGAATTGGTCAAAACGCACGGAGAACGCGTGAGCAGCAGCCACATTGGCGCTTTTAAGTCAACAGACGCCGATACGTTGTTGGATATCGCGAGAATTTTCGCCGTTCTGGTGCAGGAGAGGTTGTGCGACAAGTTGCTACGAGACCGGGCGTACCGCGAAGCTCTTGCGTCAAGCAGAAAGGCTGGTTTGCTATCTTTAGACGTCGAGGAGGAAGTAAAGCAGGTCTGCGGGCCTGACGTTATCGACGAATCCAACACCGAACTCCCTACCGAAACGCTCAATTTATCCTCGCTTCGTCAAAACAGCGGACCCGCGCCAAGTTCGCATTACAGTATCGAAATAAGCTTGCCAACTGCTCCAGAATCCAGTATGGAAGAATCGAAGCCGACGAGTCTACGAACGCCAACAGATGGTGAAGCCACAAACGATCAAGTCCAGCTACGGCATATTTGCGCAAAGGACCGGCGACCGACAGCGGAAGCCAATGATGCGACGAAGTCGAAGCGAGACGAATCTAGCTCCCAACTCGTAACATCCAAAAACACGGATCTCAGATTTTCATCCATCCCGAACGACGACGAGAAGCTTCGAGCTCGACGGCTAAGTGATAACGATCGCAAACTGCCAACGCAACCAATCGGCGACGCAGAAGAAGTGTTTTACGACTTCGTGATCCTGCACGAAGCCGAAGACGCCGACGAGGCCCAAAGGCTCAGGGACAAACTCGAACGTATGACTTCTGGAGTGGGTGCAACGTTTTCCGACGACTTCGCGCAACCAGGAATGTCGACGTTGCGATGCATAGAGGACGCCATCGAGGACTCCGCGTtcgtgctgctgctgctcaccCGGAACTTCGGCTCCAGCCTCAGCGCGACTAGCGCAGATTCGGCGATCGTGAATTCGTTGGAAAACCACCACAAAATGAACTCGGTGATTCCGCTGCTGCCTCGCAATAACTGTTTGCCGCGCCAACGTTTTCCGCTGGTGCTTCAGACGAAGGTCCCTCTCGATGAGAGCAGCAGAATGTTCGAACGCAGCGCCCGAAAGGCCATCTCATCGGAGAAAGTCGCGACTCAGAAGAAGATCTGGACGAGGAAACGGCTTCGTGCTAAAATAGTAGAGGAGCAGAAGAGACTACAAGAGGAGAACGCTGCGAACGTGGAGCTGCAACGAGAGAAGGAAAAATTAGCGCGACTGAGGCTGGAAAGCGAAGTGCAGCAAAATTACGCATTTTATCCGCCATCTGCCCCTCCGTCGCATGGAGcgatgcagcagcagcagcagcagccgcaGTGCATCCACATCGAGAACGCACAAAATATCATGATCGGAAATCACTCGACGATGAATATCGACCATGCCAAAAATTTGGCAGATCAGTTTGATTCATAAACCTggtgtgtgttttcacaaaaacaggTGTTGTGAGAAATCACGCGTGCCTCTGGGAACTGTtgtttcagccaatcagaacactgTCAATCTTTTGTTGAATTGTCAGGTTCGCTAACATCCGGTTGGTTGATGTGCTTTTGGGGGCGGGGTTGGAAGAAGGCCTgataaattttatattgttgtatCAATTATGGTGGTTTATAGTtctctattttatatatatatatatatatatatacacatttattattacattttgcttaaaaagTCCATCAACAAAACCCATAAGAAAaccatcaaagaaaaaaaaaagaaagcaaaatgtCTAATATGTTACCGTAaggaaaaaggtaaaaatataataaaatataatatataatataaatatataataaaattatatttgccAATTGACAGCAAGGTAGGtgtttgcactttttttgtgttgtattaatgacaaaacaattCTAAATTATTCTGTATTACTGTGCTTGAagggaaatattttaatttttaataaaaataattctgtaaaA
>XM_043223908.1
GCCATCTTCTGGTCCCAAAAGTCCCAAAGAAGTGTTGACTTTGTTCCGCATTACAAGAGAAAGCGAGAAGACAGACGTTCGGACTCGAAAACATCCATGCGTTTTAGATTTCCTGCTTCTGAATGAATGCAGAACTGTTACAAAGCATTCAGGAGCTCACGTTCGTCTGAACGCCTTCGGATCGAATGGAATGGCTTGAACATGTCGTGTGAGAGCGCACGTTCGCGTATGATCGTCCGCATTTGCGTTAACGATGGCAGCAGAGCTCGTGGATCAAGGATTCGCGAATCTCGCCAAGGCGTTCGAGGTCATTTCCCAGGCCGGCCAGGATCGCTGGGTCAGCCTGACATTCAAAAGGGCCGACACGCGGGCCGAGGAGATGGTGAATGTCATGTGCTTGATTCTCCTCAAGAAGATCGGAGAGGCGCATGCTAAGCTAGCGGCTAACGTCGACAGCAGCATCGGAAAATACTTAGCCGAATTGGTCAAAACGCACGGAGAACGCGTGAGCAGCAGCCACATTGGCGCTTTTAAGTCAACAGACGCCGATACGTTGTTGGATATCGCGAGAATTTTCGCCGTTCTGGTGCAGGAGAGGTTGTGCGACAAGTTGCTACGAGACCGGGCGTACCGCGAAGCTCTTGCGTCAAGCAGAAAGGCTGGTTTGCTATCTTTAGACGTCGAGGAGGAAGTAAAGCAGGTCTGCGGGCCTGACGTTATCGACGAATCCAACACCGAACTCCCTACCGAAACGCTCAATTTATCCTCGCTTCGTCAAAACAGCGGACCCGCGCCAAGTTCGCATTACAGTATCGAAATAAGCTTGCCAACTGCTCCAGAATCCAGTATGGAAGAATCGAAGCCGACGAGTCTACGAACGCCAACAGATGGTGAAGCCACAAACGATCAAGTCCAGCTACGGCATATTTGCGCAAAGGACCGGCGACCGACAGCGGAAGCCAATGATGCGACGAAGTCGAAGCGAGACGAATCTAGCTCCCAACTCGTAACATCCAAAAACACGGATCTCAGATTTTCATCCATCCCGAACGACGACGAGAAGCTTCGAGCTCGACGGCTAAGTGATAACGATCGCAAACTGCCAACGCAACCAATCGGCGACGCAGAAGAAGTGTTTTACGACTTCGTGATCCTGCACGAAGCCGAAGACGCCGACGAGGCCCAAAGGCTCAGGGACAAACTCGAACGTATGACTTCTGGAGTGGGTGCAACGTTTTCCGACGACTTCGCGCAACCAGGAATGTCGACGTTGCGATGCATAGAGGACGCCATCGAGGACTCCGCGTtcgtgctgctgctgctcaccCGGAACTTCGGCTCCAGCCTCAGCGCGACTAGCGCAGATTCGGCGATCGTGAATTCGTTGGAAAACCACCACAAAATGAACTCGGTGATTCCGCTGCTGCCTCGCAATAACTGTTTGCCGCGCCAACGTTTTCCGCTGGTGCTTCAGACGAAGGTCCCTCTCGATGAGAGCAGCAGAATGTTCGAACGCAGCGCCCGAAAGGCCATCTCATCGGAGAAAGTCGCGACTCAGAAGAAGATCTGGACGAGGAAACGGCTTCGTGCTAAAATAGTAGAGGAGCAGAAGAGACTACAAGAGGAGAACGCTGCGAACGTGGAGCTGCAACGAGAGAAGGAAAAATTAGCGCGACTGAGGCTGGAAAGCGAAGTGCAGCAAAATTACGCATTTTATCCGCCATCTGCCCCTCCGTCGCATGGAGcgatgcagcagcagcagcagcagccgcaGTGCATCCACATCGAGAACGCACAAAATATCATGATCGGAAATCACTCGACGATGAATATCGACCATGCCAAAAATTTGGCAGATCAGTTTGATTCATAAACCTggtgtgtgttttcacaaaaacaggTGTTGTGAGAAATCACGCGTGCCTCTGGGAACTGTtgtttcagccaatcagaacactgTCAATCTTTTGTTGAATTGTCAGGTTCGCTAACATCCGGTTGGTTGATGTGCTTTTGGGGGCGGGGTTGGAAGAAGGCCTgataaattttatattgttgtatCAATTATGGTGGTTTATAGTtctctattttatatatatatatatatatatatacacatttattattacattttgcttaaaaagTCCATCAACAAAACCCATAAGAAAaccatcaaagaaaaaaaaaagaaagcaaaatgtCTAATATGTTACCGTAaggaaaaaggtaaaaatataataaaatataatatataatataaatatataataaaattatatttgccAATTGACAGCAAGGTAGGtgtttgcactttttttgtgttgtattaatgacaaaacaattCTAAATTATTCTGTATTACTGTGCTTGAagggaaatattttaatttttaataaaaataattctgtaaaA

Function

NR:

description
TIR domain-containing adapter molecule 1-like

GO:

id name namespace
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0005515 protein binding molecular_function

KEGG:

id description
K05842 TRIF; toll-like receptor adapter molecule 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223906.1 False 2428 mRNA 0.47 3 2749251 2752252
XM_043223907.1 True 2508 mRNA 0.47 2 2749268 2752252
XM_043223908.1 False 2412 mRNA 0.47 3 2749255 2752252

Neighbor

gene id symbol gene type direction distance location
gipc3 gipc3,LOC107678090,LOC107559818,LOC107562094,LOC108424935,LOC108270865 coding upstream 469522 2272056 ~ 2279729 (+)
lim2.2 lim2.2,LOC107562091,LOC107679082,LOC107744653,LOC107678104 coding upstream 504436 2241399 ~ 2244815 (+)
ftsj3 ftsj3 coding upstream 508288 2232593 ~ 2240963 (+)
rpl36 rpl36,LOC106560598 coding upstream 528447 2218269 ~ 2220804 (+)
LOC122327129 hrh4,LOC107678092,LOC107559824,LOC107548836,LOC107679085,LOC103041953 coding upstream 550250 2188337 ~ 2199001 (+)
timm44 timm44,LOC107561596,LOC107660209,LOC107704494,LOC108441293 coding downstream 389 2752641 ~ 2759437 (+)
LOC122327634 ctxn1,LOC108441290,LOC106573568 coding downstream 18502 2770754 ~ 2784530 (+)
cers4a cers4a,LOC107561597,LOC107717160 coding downstream 115836 2868088 ~ 2875916 (+)
c22h19orf44 NA coding downstream 216243 2968495 ~ 2977582 (+)
atcaya atcaya,LOC107698602,LOC107727562,LOC107702639,LOC108430235 coding downstream 282806 3035058 ~ 3040559 (+)
G148742 NA non-coding upstream 230109 2518930 ~ 2519142 (+)
G148452 NA non-coding upstream 408840 2338819 ~ 2340411 (+)
G148406 NA non-coding upstream 596075 2151775 ~ 2153176 (+)
G148403 NA non-coding upstream 605179 2143101 ~ 2144072 (+)
G148402 NA non-coding upstream 606901 2140507 ~ 2142350 (+)
G148781 fbn2b,ctxn1,LOC107549363,LOC107742800,LOC107704489,LOC108441290,LOC106573568 non-coding downstream 18523 2770775 ~ 2837949 (+)
LOC122327636 NA non-coding downstream 54351 2806603 ~ 2856084 (+)
G148830 NA non-coding downstream 238033 2990285 ~ 2992412 (+)
G148926 NA non-coding downstream 350320 3102572 ~ 3102903 (+)
G148942 LOC107702631,LOC107698575,LOC107549383 non-coding downstream 431276 3183528 ~ 3189154 (+)
G148388 NA other upstream 603691 2143885 ~ 2145560 (+)
LOC122328040 NA other upstream 868368 1621992 ~ 1880883 (+)
LOC122327475 NA other downstream 206848 2959100 ~ 2963003 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other downstream 292386 3044638 ~ 3048132 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other downstream 361949 3114201 ~ 3153581 (+)
tma7 NA other downstream 471365 3223617 ~ 3224491 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other downstream 477015 3229267 ~ 3238958 (+)

Expression


Co-expression Network