G148402


Basic Information

Item Value
gene id G148402
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2140507 ~ 2142350 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU219318
TTCTCGGCGCCGGAGAAGATGGAGTAGATCTTGTTGCGCTTGCGCTCCTCGGGCACCGAGGGCAGGGGCTTGGAGCTGTGGTTGGCCGCCAGGCCGTCTTTGCCTCCGCCGCTGAAGATGGTGCTGCTCATCCTGACGGGCGGAGCGGGCGGCTTGTCCTCCACGTCCCCATTGTCACACCTGTGAAGCGGAGCTCGAAGTGCGGCGCGACGCGCTCCGGCGGGCCGCGGGGGAGCTGCTCTGTCCGGGGAGAGGCGTGAGGCGACGCGGGAGCCCCGTCCGATGGGTCGTGCGCCGCGTACCGCTGGTCTCGGCAGCTTTTTTGTGCTGGTTTGGGGAAGGGGAGGCGCCCAGCAGCGTCTCTTTCTGCCCTCGCCTGCAGCAAACAGACAGCGAC
>TU219321
TTCTCGGCGCCGGAGAAGATGGAGTAGATCTTGTTGCGCTTGCGCTCCTCGGGCACCGAGGGCAGGGGCTTGGAGCTGTGGTTGGCCGCCAGGCCGTCTTTGCCTCCGCCGCTGAAGATGGTGCTGCTCATCCTGACGGGCGGAGCGGGCGGCTTGTCCTCCACGTCCCTGTGAAGCGGAGCTCGAAGTGCGGCGCGACGCGCTCCGGCGGGCCGCGGGGGAGCTGCTCTGTCCGGGGAGAGGCGTGAGGCGACGCGGGAGCCCCGTCCGATGGGTCGTGCGCCGCGTACCGCTGGTCTCGGCAGCTTTTTTGTGCTGGTTTGGGGAAGGGGAGGCGCCCAGCAGCGTCTCTTTCTGCCCTCGCCTGCAGCAAACAGACAGCGAC

Function

GO: NA

KEGG:

id description
ko03430 Mismatch repair

RNA

RNA id representative length rna type GC content exon number start site end site
TU219318 True 397 lncRNA 0.68 2 2140507 2142350
TU219321 False 385 lncRNA 0.69 2 2140507 2142350

Neighbor

gene id symbol gene type direction distance location
zgc:174224 NA coding upstream 20441 2106766 ~ 2120066 (+)
LOC122327908 LOC107577399,LOC107745441 coding upstream 35466 2054359 ~ 2105041 (+)
LOC122327922 LOC568664,LOC107573273 coding upstream 48412 2084409 ~ 2092095 (+)
LOC122327909 LOC107577399 coding upstream 87416 1964794 ~ 2053091 (+)
cep19 NA coding downstream 4335 2146685 ~ 2147805 (+)
impact impact coding downstream 13885 2156235 ~ 2183233 (+)
LOC122327129 hrh4,LOC107678092,LOC107559824,LOC107548836,LOC107679085,LOC103041953 coding downstream 45987 2188337 ~ 2199001 (+)
rpl36 rpl36,LOC106560598 coding downstream 75919 2218269 ~ 2220804 (+)
ftsj3 ftsj3 coding downstream 90243 2232593 ~ 2240963 (+)
G148401 NA non-coding upstream 1748 2138263 ~ 2138759 (+)
trnam-cau_117 NA non-coding upstream 10366 2130069 ~ 2130141 (+)
G148393 NA non-coding upstream 21934 2117365 ~ 2118573 (+)
LOC122328034 NA non-coding upstream 126947 1993694 ~ 2013560 (+)
LOC122328043 NA non-coding upstream 182927 1956214 ~ 1957580 (+)
G148403 NA non-coding downstream 751 2143101 ~ 2144072 (+)
G148406 NA non-coding downstream 9425 2151775 ~ 2153176 (+)
G148452 NA non-coding downstream 196469 2338819 ~ 2340411 (+)
G148742 NA non-coding downstream 376580 2518930 ~ 2519142 (+)
G148781 fbn2b,ctxn1,LOC107549363,LOC107742800,LOC107704489,LOC108441290,LOC106573568 non-coding downstream 628425 2770775 ~ 2837949 (+)
LOC122328040 NA other upstream 259624 1621992 ~ 1880883 (+)
LOC122327951 NA other upstream 283365 1854867 ~ 1857142 (+)
LOC122327950 NA other upstream 501501 1626562 ~ 1639006 (+)
G148295 NA other upstream 515317 1624472 ~ 1625190 (+)
G148222 NA other upstream 755660 1379291 ~ 1384847 (+)
G148388 NA other downstream 1535 2143885 ~ 2145560 (+)
LOC122327475 NA other downstream 816750 2959100 ~ 2963003 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other downstream 902288 3044638 ~ 3048132 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other downstream 971851 3114201 ~ 3153581 (+)
tma7 NA other downstream 1081267 3223617 ~ 3224491 (+)

Expression


Co-expression Network