zgc:174224


Basic Information

Item Value
gene id zgc:174224
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 2106766 ~ 2120066 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223711.1
TGCTGGAATATTCCCATCAGTCTACAAGTGAAGACGAGCATCAGAGAATCAGGAAGAAGAGAAATctgcagaaacagagagaacatGAGAGATCCAGAACCCTGCAGAATGAAACACACTGAAGAACAAACAGGATTGATTGAAGCCAAAAAAGAGAACGAAGAGGAGGACATACATGTCAAAATCGAAGAAAATAATTTCAGTCCCTTTCAAACTGAGCAGAAAGGTTCGCCGAAAAGAAGAGCCAAGAAATCTTTCATCTGCACTGAGTGTGGAAAGACTTTGACGTATAAATACAGTCTCGATGTtcacatgaggatccacaccggagagaaaccctaCACGTGCTATTACTGCGAAAAGAGCTTCACGCAGTCGGCAAACCTCAAGGACCACATGAAGATCCACACCGGGGAGAAACCGCACGAATGCGATCAGTGCGGAAGAACCTTTCTGTGGATCTCAAACATGAAGAAGCACATGGCGGTTCACTCCGCGGAGAAACCGCATGCGTGCCCTTCGTGCGGCAAGAGCTTTTCGTGTCTGCGAAGTTTAAAAGTGCATCAGAGGATACACAGCGGTGTGAGGGATTACATGTGCTGCGAGTGTGAGAAGACCTTTCTGACCGCCGATAAACTGAAGCGGCACCaaaggatccacaccggagagaaaccttacaagtgttcacactgcGGCAAGAGATTCAGCCAGCTAGAAACCCTGAAGTCCCACGacaggatccacaccggagagaaaccctaTCACTGCGCTGcttgcgggaagagcttcaatCGATCGTCTTCTTTACACAGGCACACGAGAAACAAGCACAACAAGATCTTCAGAGCCAGCTCTTGAAGCTCTGACCGGACATGCATCTAGACCTAAAATATCTTCTGTGTGAATCTGTCCAGACAAAGAAGCGCCA
>XM_043223712.1
ATATCCCCATCAGTCTACAAGTGAAGACGAGCCTCAAAGCATCAGAAAAAAGAGTTTATTGAAGGACAGAGAGAACATGAGAGATCCAGAACCCTGCAGAATGAAACGCACTGAAGAACAAACAGAACCTGGATCCTTCTTCTACGCAGCCATGATGTTGTAATCGATGCAGTATGTGGTCTGGCATTGTCGTGTTGAAATAATGCAAGTTCTTGCCTGAAAGAGACAACTtctggatgggagcatatgttgttctagaacTTGGATATACCTTTCAGGattgatggtgcctttccagaTGTGTAAGCTGCCACAGTCCATTTTAGATGGCCCAGAGAAAACACCTTCTGGATCATGTTTAGACCTAATGGAGAAACATCatgtcaaaaatgaaaaaatcaatGTCAAGTCACAGACTGAGGGTATCTCTTTACTGGACACAAGAGACAAGAAAAGTTATGGCTGCTCTCAGTGCGGCAAGAATTTGACATGCAAGAAGAGTCTGAAGATTCACATGAAGATCCACACGGGAACGAAACCTTACACATGTGagcagtgcgggaagagtttgACATGCAAGAAGAGTCTGAAGATccacatgaggatccacacaGGAGAAAAACCGTACAcatgtgatcagtgcgggaagagtttcagGCAACAAGGACACCTGAAGGACCACATGAACGTCCACAGCGTGGAGAAGCCGCACCCATGTGGTCAGTGTGGCAAGTGTTTCGCTTACAAACAGAGTCTCAAGGCTCACATGAAGATCCACACGGGAGAGAAGCCGTACACGTGcgatcagtgcgggaagagatTCAGACAGTCGTCGCACCTTAAAGAGCACATGAACagccacggtgtagaggagttGTACACAGCCAAGAAATCTTTCATCTGCACTGAGTGTGGAAAGACTTTGACGTATAAATACAGTCTCGATGTtcacatgaggatccacaccggagagaaaccctaCACGTGCTATTACTGCGAAAAGAGCTTCACGCAGTCGGCAAACCTCAAGGACCACATGAAGATCCACACCGGGGAGAAACCGCACGAATGCGATCAGTGCGGAAGAACCTTTCTGTGGATCTCAAACATGAAGAAGCACATGGCGGTTCACTCCGCGGAGAAACCGCATGCGTGCCCTTCGTGCGGCAAGAGCTTTTCGTGTCTGCGAAGTTTAAAAGTGCATCAGAGGATACACAGCGGTGTGAGGGATTACATGTGCTGCGAGTGTGAGAAGACCTTTCTGACCGCCGATAAACTGAAGCGGCACCaaaggatccacaccggagagaaaccttacaagtgttcacactgcGGCAAGAGATTCAGCCAGCTAGAAACCCTGAAGTCCCACGacaggatccacaccggagagaaaccctaTCACTGCGCTGcttgcgggaagagcttcaatCGATCGTCTTCTTTACACAGGCACACGAGAAACAAGCACAACAAGATCTTCAGAGCCAGCTCTTGAAGCTCTGACCGGACATGCATCTAGACCTAAAATATCTTCTGTGTGAATCTGTCCAGACAAAGAAGCGCCA

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223711.1 False 928 mRNA 0.48 2 2118973 2120066
XM_043223712.1 True 1568 mRNA 0.48 4 2106766 2120066

Neighbor

gene id symbol gene type direction distance location
LOC122327908 LOC107577399,LOC107745441 coding upstream 1725 2054359 ~ 2105041 (+)
LOC122327922 LOC568664,LOC107573273 coding upstream 14671 2084409 ~ 2092095 (+)
LOC122327909 LOC107577399 coding upstream 53675 1964794 ~ 2053091 (+)
LOC122327925 LOC568664 coding upstream 71176 2013792 ~ 2035590 (+)
LOC122328122 NA coding upstream 157399 1942150 ~ 1949367 (+)
cep19 NA coding downstream 26619 2146685 ~ 2147805 (+)
impact impact coding downstream 36169 2156235 ~ 2183233 (+)
LOC122327129 hrh4,LOC107678092,LOC107559824,LOC107548836,LOC107679085,LOC103041953 coding downstream 68271 2188337 ~ 2199001 (+)
rpl36 rpl36,LOC106560598 coding downstream 98203 2218269 ~ 2220804 (+)
ftsj3 ftsj3 coding downstream 112527 2232593 ~ 2240963 (+)
LOC122328034 NA non-coding upstream 93206 1993694 ~ 2013560 (+)
LOC122328043 NA non-coding upstream 149186 1956214 ~ 1957580 (+)
G148344 NA non-coding upstream 187943 1917581 ~ 1918823 (+)
LOC122328051 NA non-coding upstream 205275 1900192 ~ 1901491 (+)
LOC122328033 NA non-coding upstream 212458 1892352 ~ 1894308 (+)
trnam-cau_117 NA non-coding downstream 10003 2130069 ~ 2130141 (+)
G148401 NA non-coding downstream 18197 2138263 ~ 2138759 (+)
G148402 NA non-coding downstream 20441 2140507 ~ 2142350 (+)
G148403 NA non-coding downstream 23035 2143101 ~ 2144072 (+)
G148406 NA non-coding downstream 31709 2151775 ~ 2153176 (+)
LOC122328040 NA other upstream 225883 1621992 ~ 1880883 (+)
LOC122327951 NA other upstream 249624 1854867 ~ 1857142 (+)
LOC122327950 NA other upstream 467760 1626562 ~ 1639006 (+)
G148295 NA other upstream 481576 1624472 ~ 1625190 (+)
G148222 NA other upstream 721919 1379291 ~ 1384847 (+)
G148388 NA other downstream 23819 2143885 ~ 2145560 (+)
LOC122327475 NA other downstream 839034 2959100 ~ 2963003 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other downstream 924572 3044638 ~ 3048132 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other downstream 994135 3114201 ~ 3153581 (+)
tma7 NA other downstream 1103551 3223617 ~ 3224491 (+)

Expression


Co-expression Network