G148942 (LOC107702631,LOC107698575,LOC107549383)


Basic Information

Item Value
gene id G148942
gene name LOC107702631,LOC107698575,LOC107549383
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 3183528 ~ 3189154 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220299
aaacaacaatactGAAGGTCCTCGGTGGGACCTCTTGTCCACCGATGATCTGCAGTTCATAAAGTCCAGAGTCTTCAGTTCTGGTGTTAGTGATGTTCAGAGATCCAGTCCGTTCGTCCAACtgcagtctgtctctgaatttCCCATCAAGAACATCATTGTACAAAGAGATCTTATTGACTACATTGTTGATTTGAGCTATACGAGTGCGGCCGGGTCCAAATGTCCACAGTATGAGTTCATATTTCTGTATGTCAGTAAGGTCGGTCTGTAGCGTGACagaatctccctccatcaccGACTTCACAAAAtcaccaaacacacctgaagaaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC107702631 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220299 True 334 lncRNA 0.45 2 3183528 3189154

Neighbor

gene id symbol gene type direction distance location
LOC122327489 LOC107702645,LOC107566368 coding upstream 2624 3175884 ~ 3180904 (+)
LOC122327513 NA coding upstream 16707 3163691 ~ 3166821 (+)
cers1 cers1,LOC107702637,LOC107566364,LOC107698599,LOC107733357 coding upstream 103613 3066926 ~ 3079915 (+)
mydgf mydgf,LOC107727555,LOC107702644,LOC107733317,LOC107698601,LOC107549393,LOC566052,LOC107566370 coding upstream 130809 3049125 ~ 3052719 (+)
LOC122327553 mibp,LOC107566367,LOC107702642,LOC107727561,LOC107734093,LOC107698603,LOC107549391 coding upstream 139037 3041516 ~ 3044491 (+)
zgc:171566 zgc:171566,LOC107718463,LOC107698580,LOC107549371,LOC107702651,LOC107712179,LOC108444051 coding downstream 4165 3193319 ~ 3196364 (+)
si:dkey-222f2.1 si:dkey-222f2.1,LOC107712176,LOC107694007,LOC107718458,LOC107698573 coding downstream 56486 3245640 ~ 3250629 (+)
LOC122327483 NA coding downstream 89027 3278181 ~ 3280208 (+)
zmp:0000000652 NA coding downstream 98766 3287920 ~ 3289605 (+)
LOC122327571 NA coding downstream 176883 3366037 ~ 3367223 (+)
G148926 NA non-coding upstream 80625 3102572 ~ 3102903 (+)
G148830 NA non-coding upstream 191116 2990285 ~ 2992412 (+)
LOC122327636 NA non-coding upstream 327444 2806603 ~ 2856084 (+)
G148781 fbn2b,ctxn1,LOC107549363,LOC107742800,LOC107704489,LOC108441290,LOC106573568 non-coding upstream 345579 2770775 ~ 2837949 (+)
G148742 NA non-coding upstream 664386 2518930 ~ 2519142 (+)
G148973 NA non-coding downstream 36055 3225209 ~ 3226579 (+)
G148975 NA non-coding downstream 38550 3227704 ~ 3228830 (+)
G148979 NA non-coding downstream 55987 3245141 ~ 3245582 (+)
G148968 NA non-coding downstream 66308 3255462 ~ 3257706 (+)
LOC122327591 NA non-coding downstream 78969 3268123 ~ 3271755 (+)
LOC122327293 myo9b,LOC107566354,LOC107702620,LOC107549373,LOC107698595,LOC107718479 other upstream 29947 3114201 ~ 3153581 (+)
loxl5a loxl5a,LOC107698563,LOC107549379,LOC107733348,LOC108430202,LOC105011451 other upstream 135396 3044638 ~ 3048132 (+)
LOC122327475 NA other upstream 220525 2959100 ~ 2963003 (+)
G148388 NA other upstream 1037968 2143885 ~ 2145560 (+)
LOC122327951 NA other upstream 1326386 1854867 ~ 1857142 (+)
tma7 NA other downstream 34463 3223617 ~ 3224491 (+)
dnase1l4.2 LOC107549369,LOC107718466,LOC107712178,LOC107698583,LOC107566352,LOC107702653 other downstream 40113 3229267 ~ 3238958 (+)
LOC122327575 NA other downstream 64584 3253738 ~ 3254861 (+)
LOC122327325 NA other downstream 108208 3297362 ~ 3592373 (+)
G149028 NA other downstream 381939 3571093 ~ 3574473 (+)

Expression


Co-expression Network