LOC122327317


Basic Information

Item Value
gene id LOC122327317
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4094391 ~ 4112520 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222589.1
TTTTAGATACTCACACAGACACGTTTGACTCGCCTTAACAGACGACAAACATATCTAATATCTTTCAGCATTACAGATACAACCAAGAACATCGAACATAAAAGTACCTAAAATTAATTAGTAAACTAGTTTTTCTGTGCGAGGTCgggttttgagttattttcttctatttattataacaacattatgaataactttattttgttcatgtttttattgatcGTGAAAGGTGTATTTGGTGATGCAGATGTTGTGTCGGTGAATGAAGGAGATTCGGTCACCCTGCACACTGGTCTCACTGAAATACAGAGAAATGATGTGATAGACTGGAGGTTTGGACCTGGAAGTGACCAAATAGCTAGAATCAATAGACCGGCCAACAAAGCAGATACATACGATGGTCCTGATGAGAGATTCAGAGGCAGGCTGGAGCTGGACAATCAGACTGGATCACTGACCATCAGAGACATCATTaccacagactctggactttataAAGTAGACCTCCCCAATGACAAGACTTTAGAATTCAGTCTCAGTGTTACACGAGCGGATGCAGCGGGGCCGATATTAGTGATGAAGCGAGATTCTGTTACTCTAAAAACTGAAGTTCCTGACATTCATAGATATGATGAGATACAGTGGAGTGGACAGCAGAAATATCCTATAGCTGAAATCAACAGAACAGCTGGAATCTTCAGCACATCTGATGGTCCTGaggagagattcagagacagactacAGCTGGACTGTttgactggatctctgaccatcaggaACATTGAAAGCAGCCTCTCTGGACTTTATGAAGTTAACATCAGTGGCAGCAAACACACCATATACAAGACATTCAGTGTCATGGTCAGCGGTGCATTGGAGACAGTGTCAGTGATGGAGGGATATCCAGTCACTCTAAGCTCTGCTCTTACTGAAATACAGGTCAATGATATCATACAGTGGAAGTTCGGAGACACTAGGATAGCTAACGTCAGTCGAACAGCCACACCATTCTATGAAGATGATGCAAGATTTGAAGGTAGACTGAAAGTGAATCATCAGACTGGATCACTGACCATTACCGAAACCAATGAAAAAAACTCTGGACTTTATAAACTACAGATCAGCAGCGGCCGACGCACCATACTCAGGACGATCACGGTCTCTGTCACTGTCACTGATCTGTCTTCAGTTGCTAAAGCAGTAATAGCTgttggtgttgttgttgttctgctGGTGTTTGGAGCTGGTGTTTTTTACTATCGCCGCAAGATCTCTGAACTCCAAAGACAAAAGAAGATGATTGTTCCTGTGATGGAGGGAGAATCTGTCACTCTAGAGTctgatattaaaatacagaGAGGTGATGAAATACAGTGGATATTTGAAGACTGTGTTATAGCTGGAATCAAAGGAAATGACAGAGAGATCTACATAAATAATAGCCCTGATGACAGATTTAAAGAAAGACTGGAGCTAAAAAGGATAACTGGATCCCTGACCATTAAAAATATCAGACCTGAACATGCTGGAATATATAAACTGAAGATCGGAGACAGAAGAGTCTCCTACAAGACGTTCAGTGTTAAAATCATTGaaatgaagacaATATCGGAGTTTGAGGGGAATTATATTACTCTAAGAACCAATGTTAGAATAAACAGAGGTGTTCGGATGCTGTGGCTGTTTGGAGATGAAAACTCGCTCATAGCTAATATCAAAGGAGGCACCGAAGAGATCATTAGATATGATGATGTGAGATTCAGAGGCAGACTGGTGGTGCACGAGAGGACTGGAGATCTGACCATCACAAACATTACAACCGTCCATGCAGGAATCTATAAACTGAAGATCAGCAGTGATGAAGGGtctaaaaaaatgatattcagTGTTTCTGTCAAAGCGAGGAGGGAACAAGTGAAGGAGGGAAcatctgtctttttaaaaacttatgTTGAAATACAGGAGAATGATCAGATCTTGTGGACGTTTGGAGCTGAAAAATCTGTCTTAGTTCAATTCAAAGAAGGGATCACTACATATTTTGATGAGAGATTCAGAGGCAGACTTCAACTGGATAAGAAGACTGGAGATCTGACCATCGCAGACACCAGAGCTGAACACACTGGACTTTATGAGGCTCTGATCTTTAGCAGCAGAGGGACTTCATACAGGAGATACGATGTTGTTATGTATGTGGAGCTTGTGAGTGCTGTTGAGGAAGACACTACCATTCTAAACACTGGTCTTCCCGATATAGAGAAAAACAGTCGCATAGTGTGGATGTTTAGAGATCATGACTCTCCCATAGCTGAAATTAAAAGAGGAACCGGACACACCCCTAAATATGACGATGGTCCTAATGtaagattcagagacagactgaagctggacgagaagactggatctctgaccatcacagACATCACACCTGAACATGCTGGAGATTATCAGCTGCATATTAGCAATGATGAAGGGTCCACAAGCAAGAGATTCTATATTGGAGTGATGAGCAAAACAATGACAGAAGAACAAGAAGATGGAGATAATGACTCAGCGATTGTGGAGATACCACCGTTAAATGAAGGAGTTCCTGATGGAGTGATTGAGTGATTGAGCAGGaggggatttttattttatcaagaTAAGACATGATCATCACTATCAGACACTTTGCCATCatcaataagatttttttctcctcttgaATTCGTCcagtaaaaaatgaataaataataattttcagttTCTCATAGctttgaaatatgcattttaacatgTGTGGACCACAGCAGTAtttctttaatcatttcatGTGATATTTGATATAATAACAAACACCGATACCAgcttaatgttgttgtttgacAGTGTCTCCTGAGCTGAGATCACATGACCTTCTCCTCGTAGAAATAAATCAGATTAAACCACAGTTCAGAAACATCTTTGACCATCAGTGTCACATTCAGTAATAACTTCAGTGTATCTGTTACTTTTAGTAGAAATGAACCAGCTactgaaattatattatttttattaacattttagatttaattttatttgacttgtACACTCTTAACCCAAATTAGCTGACAATACAATATAACTTACAATCTTAAATGGACTATTCAAATTGAGAATTGAATTCTCATAATTGAGACACAACGCAGACATCAAGAAGCAGCATATGAATCTTAGCAATGTTGACAATCAACAGAATGCTTcatgctgcagtgcatgctgggtaacaCCATATTAGAAACTGCCACCATGCACTGCAGTATGACAAAATATTGTCACCACTGTTGAGTATCATATGATGTAGTCAAGTGTTCATGTCAAATAGTCTGAGCCAACTCATTATTTTCTCTCATACCCCTCTTTTgccaattattttaaaatgatcagggTGTCATGTGTTTAATTTCACTTTCTTATCAcagtaatgctaaatttaagTCAACATCTTAAACAAAGACTACATTATGATGCTCATTCATCATGAGTTACAAGCAAAAAACCTAACTAAAGCAAGTTACAATTGTTAAGATGtgtttatatactataaaactgtcaataaaaccaaaacattgaAATGCCATTACATTTcttcacattaataaaaaaatgtcaaagtaTGATATAAATAAGACATCAATAATGTGAACTAATGAATTTCGGTAAAGACTACTATTGTAAACTTAAATAGTCTACTTAAAATTGTATGTTCACCCAACTTAACCTGTTTAGTTTCATCCTGTGCAAAAACTGAAATGGTTTAGTACAACGGGTTTTCCACGCAATTCTCTAGCAATGTCAACTAATTCGGTTTAAGATTATttcttttgcacattttatgataaataattattcCTTAATATGTTATCCAGTTATATGCTTTTGAATTGAGTCTGTTGCACAATGATAACACATAGtgttgtgtctgtttgttttattctcatCTGTTATAACTTTTgtcaaaagtgtgtgtttgaccaATAAACAGTATCTTGTAGGA
>XM_043222590.1
TTTTAGATACTCACACAGACACGTTTGACTCGCCTTAACAGACGACAAACATATCTAATATCTTTCAGCATTACAGATACAACCAAGAACATCGAACATAAAAGTACCTAAAATTAATTAGTAAACTAGTTTTTCTGTGCGAGGTCgggttttgagttattttcttctatttattataacaacattatgaataactttattttgttcatgtttttattgatcGTGAAAGGTGTATTTGGTGATGCAGATGTTGTGTCGGTGAATGAAGGAGATTCGGTCACCCTGCACACTGGTCTCACTGAAATACAGAGAAATGATGTGATAGACTGGAGGTTTGGACCTGGAAGTGACCAAATAGCTAGAATCAATAGACCGGCCAACAAAGCAGATACATACGATGGTCCTGATGAGAGATTCAGAGGCAGGCTGGAGCTGGACAATCAGACTGGATCACTGACCATCAGAGACATCATTaccacagactctggactttataAAGTAGACCTCCCCAATGACAAGACTTTAGAATTCAGTCTCAGTGTTACACGAGCGGATGCAGCGGGGCCGATATTAGTGATGAAGCGAGATTCTGTTACTCTAAAAACTGAAGTTCCTGACATTCATAGATATGATGAGATACAGTGGAGTGGACAGCAGAAATATCCTATAGCTGAAATCAACAGAACAGCTGGAATCTTCAGCACATCTGATGGTCCTGaggagagattcagagacagactacAGCTGGACTGTttgactggatctctgaccatcaggaACATTGAAAGCAGCCTCTCTGGACTTTATGAAGTTAACATCAGTGGCAGCAAACACACCATATACAAGACATTCAGTGTCATGGTCAGCGGTGCATTGGAGACAGTGTCAGTGATGGAGGGATATCCAGTCACTCTAAGCTCTGCTCTTACTGAAATACAGGTCAATGATATCATACAGTGGAAGTTCGGAGACACTAGGATAGCTAACGTCAGTCGAACAGCCACACCATTCTATGAAGATGATGCAAGATTTGAAGGTAGACTGAAAGTGAATCATCAGACTGGATCACTGACCATTACCGAAACCAATGAAAAAAACTCTGGACTTTATAAACTACAGATCAGCAGCGGCCGACGCACCATACTCAGGACGATCACGGTCTCTGTCACTGTCACTGAGATGATTGTTCCTGTGATGGAGGGAGAATCTGTCACTCTAGAGTctgatattaaaatacagaGAGGTGATGAAATACAGTGGATATTTGAAGACTGTGTTATAGCTGGAATCAAAGGAAATGACAGAGAGATCTACATAAATAATAGCCCTGATGACAGATTTAAAGAAAGACTGGAGCTAAAAAGGATAACTGGATCCCTGACCATTAAAAATATCAGACCTGAACATGCTGGAATATATAAACTGAAGATCGGAGACAGAAGAGTCTCCTACAAGACGTTCAGTGTTAAAATCATTGaaatgaagacaATATCGGAGTTTGAGGGGAATTATATTACTCTAAGAACCAATGTTAGAATAAACAGAGGTGTTCGGATGCTGTGGCTGTTTGGAGATGAAAACTCGCTCATAGCTAATATCAAAGGAGGCACCGAAGAGATCATTAGATATGATGATGTGAGATTCAGAGGCAGACTGGTGGTGCACGAGAGGACTGGAGATCTGACCATCACAAACATTACAACCGTCCATGCAGGAATCTATAAACTGAAGATCAGCAGTGATGAAGGGtctaaaaaaatgatattcagTGTTTCTGTCAAAGCGAGGAGGGAACAAGTGAAGGAGGGAAcatctgtctttttaaaaacttatgTTGAAATACAGGAGAATGATCAGATCTTGTGGACGTTTGGAGCTGAAAAATCTGTCTTAGTTCAATTCAAAGAAGGGATCACTACATATTTTGATGAGAGATTCAGAGGCAGACTTCAACTGGATAAGAAGACTGGAGATCTGACCATCGCAGACACCAGAGCTGAACACACTGGACTTTATGAGGCTCTGATCTTTAGCAGCAGAGGGACTTCATACAGGAGATACGATGTTGTTATGTATGTGGAGCTTGTGAGTGCTGTTGAGGAAGACACTACCATTCTAAACACTGGTCTTCCCGATATAGAGAAAAACAGTCGCATAGTGTGGATGTTTAGAGATCATGACTCTCCCATAGCTGAAATTAAAAGAGGAACCGGACACACCCCTAAATATGACGATGGTCCTAATGtaagattcagagacagactgaagctggacgagaagactggatctctgaccatcacagACATCACACCTGAACATGCTGGAGATTATCAGCTGCATATTAGCAATGATGAAGGGTCCACAAGCAAGAGATTCTATATTGGAGTGATGAGCAAAACAATGACAGAAGAACAAGAAGATGGAGATAATGACTCAGCGATTGTGGAGATACCACCGTTAAATGAAGGAGTTCCTGATGGAGTGATTGAGTGATTGAGCAGGaggggatttttattttatcaagaTAAGACATGATCATCACTATCAGACACTTTGCCATCatcaataagatttttttctcctcttgaATTCGTCcagtaaaaaatgaataaataataattttcagttTCTCATAGctttgaaatatgcattttaacatgTGTGGACCACAGCAGTAtttctttaatcatttcatGTGATATTTGATATAATAACAAACACCGATACCAgcttaatgttgttgtttgacAGTGTCTCCTGAGCTGAGATCACATGACCTTCTCCTCGTAGAAATAAATCAGATTAAACCACAGTTCAGAAACATCTTTGACCATCAGTGTCACATTCAGTAATAACTTCAGTGTATCTGTTACTTTTAGTAGAAATGAACCAGCTactgaaattatattatttttattaacattttagatttaattttatttgacttgtACACTCTTAACCCAAATTAGCTGACAATACAATATAACTTACAATCTTAAATGGACTATTCAAATTGAGAATTGAATTCTCATAATTGAGACACAACGCAGACATCAAGAAGCAGCATATGAATCTTAGCAATGTTGACAATCAACAGAATGCTTcatgctgcagtgcatgctgggtaacaCCATATTAGAAACTGCCACCATGCACTGCAGTATGACAAAATATTGTCACCACTGTTGAGTATCATATGATGTAGTCAAGTGTTCATGTCAAATAGTCTGAGCCAACTCATTATTTTCTCTCATACCCCTCTTTTgccaattattttaaaatgatcagggTGTCATGTGTTTAATTTCACTTTCTTATCAcagtaatgctaaatttaagTCAACATCTTAAACAAAGACTACATTATGATGCTCATTCATCATGAGTTACAAGCAAAAAACCTAACTAAAGCAAGTTACAATTGTTAAGATGtgtttatatactataaaactgtcaataaaaccaaaacattgaAATGCCATTACATTTcttcacattaataaaaaaatgtcaaagtaTGATATAAATAAGACATCAATAATGTGAACTAATGAATTTCGGTAAAGACTACTATTGTAAACTTAAATAGTCTACTTAAAATTGTATGTTCACCCAACTTAACCTGTTTAGTTTCATCCTGTGCAAAAACTGAAATGGTTTAGTACAACGGGTTTTCCACGCAATTCTCTAGCAATGTCAACTAATTCGGTTTAAGATTATttcttttgcacattttatgataaataattattcCTTAATATGTTATCCAGTTATATGCTTTTGAATTGAGTCTGTTGCACAATGATAACACATAGtgttgtgtctgtttgttttattctcatCTGTTATAACTTTTgtcaaaagtgtgtgtttgaccaATAAACAGTATCTTGTAGGA

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222589.1 True 4015 mRNA 0.38 11 4094391 4112520
XM_043222590.1 False 3898 mRNA 0.38 10 4094391 4112520

Neighbor

gene id symbol gene type direction distance location
LOC122327467 NA coding upstream 27899 4064468 ~ 4066492 (+)
LOC122328148 NA coding upstream 43952 4048181 ~ 4050439 (+)
LOC122327441 LOC107741386 coding upstream 101446 3971398 ~ 3992945 (+)
LOC122327394 NA coding upstream 263724 3821995 ~ 3830667 (+)
LOC122328141 NA coding upstream 281350 3810802 ~ 3813041 (+)
LOC122327474 NA coding downstream 123 4112643 ~ 4116508 (+)
LOC122327450 NA coding downstream 11511 4124031 ~ 4131031 (+)
LOC122327518 NA coding downstream 27637 4140157 ~ 4144531 (+)
LOC122327514 NA coding downstream 35261 4147781 ~ 4153326 (+)
LOC122327476 LOC107704490,LOC107698560 coding downstream 41726 4154246 ~ 4185692 (+)
G149230 NA non-coding upstream 13564 4080283 ~ 4080827 (+)
G149229 NA non-coding upstream 14176 4079643 ~ 4080215 (+)
G149219 NA non-coding upstream 50432 4042503 ~ 4043959 (+)
G149211 NA non-coding upstream 54680 3975925 ~ 4039711 (+)
G149214 LOC107694241 non-coding upstream 81556 3996564 ~ 4012835 (+)
G149240 NA non-coding downstream 7011 4119531 ~ 4121608 (+)
LOC122327587 NA non-coding downstream 62689 4175209 ~ 4176848 (+)
G149235 LOC107687330,LOC107690511,LOC107709401 non-coding downstream 74845 4187365 ~ 4188839 (+)
G149249 NA non-coding downstream 78723 4191243 ~ 4213234 (+)
G149250 LOC107574539,LOC107574896 non-coding downstream 79320 4191840 ~ 4214625 (+)
LOC122327446 NA other upstream 35018 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 241020 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 314715 3777580 ~ 3779676 (+)
G148992 NA other upstream 499091 3592661 ~ 3595300 (+)
G149028 NA other upstream 519918 3571093 ~ 3574473 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 100706 4213226 ~ 4240787 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 307043 4419563 ~ 4421001 (+)
LOC122327412 LOC107698560 other downstream 585672 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 600342 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 879491 4992011 ~ 4998974 (+)

Expression


Co-expression Network