LOC122327514


Basic Information

Item Value
gene id LOC122327514
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4147781 ~ 4153326 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222934.1
TCCACACGCACGCTAACATCTCCCTTCTAAAGATTCAGCTTTCAGATCTTTTCAGCAGAACGTCGGCATGCTCAAAGAAAATGCTTCATGTGCTTTTCTTCTGCTTGTGTTTGCGGCAAGTCAACGGTGAGTTTGTTGATGATGAAGTGAAgtcagtgatggagggagattctGTCACTTTAAACTCTGGTCTTACTGAAGTAATAGATGAAGATCTAGCTCTGTGGAGGTTTGGAGCTGAAAACACCTTAATAGCTGTAATCAATGTAATAGTCGGCAGTGTTACTGTatatgatgatgttcttgatgagagattcagagacagactgaagctggatcatcaaactggatctctgaccatcactaACATCTCAACTCTACACACTGGAGAATATCAACTACAGACCAACAGTGTGAGAAAGAGCTTCAGTGTCTCTGTCTACGCTTCTTTGTCCACTCCTAAGATCAGCAGAGACTGCTcttcaacatcatcatcatcatcatcttgttCGTTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccgGACCACACATCTTAACAACACTCAACTCTGTCCTCCATGTCCAGAATGTGGCCACTGCTGTGATGTTACCGAAGCTGTAATCCGATTGGTCATCTCTGCTCTGGTGGGCGTGGCTACTGTTGTTGTACTGGCTTATGACATCAGACCCAGAAAAGATGAATAACAGAGAAGAAACCTCTAGGGAAAGAAACAGCatatatgtaaattgtTGTGGAAATGAAACATTACTttactgaattaataaaatgttgttcaccca

Function

GO:

id name namespace
GO:1990138 neuron projection extension biological_process
GO:0048588 developmental cell growth biological_process
GO:0048675 axon extension biological_process
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222934.1 True 947 mRNA 0.43 5 4147781 4153326

Neighbor

gene id symbol gene type direction distance location
LOC122327518 NA coding upstream 3250 4140157 ~ 4144531 (+)
LOC122327450 NA coding upstream 16750 4124031 ~ 4131031 (+)
LOC122327474 NA coding upstream 31273 4112643 ~ 4116508 (+)
LOC122327317 NA coding upstream 35261 4094391 ~ 4112520 (+)
LOC122327467 NA coding upstream 81289 4064468 ~ 4066492 (+)
LOC122327476 LOC107704490,LOC107698560 coding downstream 920 4154246 ~ 4185692 (+)
LOC122327454 NA coding downstream 37807 4191133 ~ 4194851 (+)
LOC122327509 NA coding downstream 126997 4280323 ~ 4287985 (+)
LOC122328151 NA coding downstream 153176 4306502 ~ 4308328 (+)
rnasel2 NA coding downstream 164898 4318224 ~ 4319380 (+)
G149240 NA non-coding upstream 26173 4119531 ~ 4121608 (+)
G149230 NA non-coding upstream 66954 4080283 ~ 4080827 (+)
G149229 NA non-coding upstream 67566 4079643 ~ 4080215 (+)
G149219 NA non-coding upstream 103822 4042503 ~ 4043959 (+)
G149214 LOC107694241 non-coding upstream 134946 3996564 ~ 4012835 (+)
LOC122327587 NA non-coding downstream 21883 4175209 ~ 4176848 (+)
G149235 LOC107687330,LOC107690511,LOC107709401 non-coding downstream 34039 4187365 ~ 4188839 (+)
G149249 NA non-coding downstream 37917 4191243 ~ 4213234 (+)
G149250 LOC107574539,LOC107574896 non-coding downstream 38514 4191840 ~ 4214625 (+)
G149238 LOC107689434 non-coding downstream 62019 4215345 ~ 4236472 (+)
LOC122327446 NA other upstream 88408 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 294410 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 368105 3777580 ~ 3779676 (+)
G148992 NA other upstream 552481 3592661 ~ 3595300 (+)
G149028 NA other upstream 573308 3571093 ~ 3574473 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 59900 4213226 ~ 4240787 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 266237 4419563 ~ 4421001 (+)
LOC122327412 LOC107698560 other downstream 544866 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 559536 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 838685 4992011 ~ 4998974 (+)

Expression


Co-expression Network