LOC122328151


Basic Information

Item Value
gene id LOC122328151
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4306502 ~ 4308328 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223857.1
TTTCTAAGAGTCAGAAGGACGTTGTATGTAACTATAAAATGTGTTCAGATGGTGTGAGTGAGGAGGGCTGAACTCTGTCGGGGGAGGACTCACGCCAGCAATTGATTTCAGCAGATAGTCCTTTTAGGTCAGTTTTGACCGAACAACTgtagaaaatgtttcttttgttctgtttgtgcTGGTGGACTCTTACTGCCGAGTCTGGcagtaaaacaaatgaaatacagTCAGTGTCTGTGATGGAGGAAGATTCTGTAACTTTACACACTTTTGTTACGAAAATACACGAAGACGATGACATACAGTGGATATTCGGAGCCAAAATCATCGCTAAAATTAGCATTGAGAAACAAAACCTTTCTACATTTTATAGCCTTgatgagagattcagagacagactgaagctggacgatcaaactggatctctgaccatcatgaacatctCAACTCTACACGCTGGAGTTTATCAGCTAAAGATAAATGCAGCTAAACTGTCATCAAAAACATTCAGCGTTTCTGTCTACTCTCCTTTGCCCACTCCTGACCTTACCAGAGATTGtgcatcatcttcatcatcttgtTCGTTGTTGTGTTCGGCGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccaaACATCTGAACATCAGTCAGCTCTGTCAGCCATGTTCAGGTCAGAGTTGA

Function

GO: NA

KEGG:

id description
ko03060 Protein export
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223857.1 True 815 mRNA 0.43 3 4306502 4308328

Neighbor

gene id symbol gene type direction distance location
LOC122327509 NA coding upstream 18517 4280323 ~ 4287985 (+)
LOC122327454 NA coding upstream 111651 4191133 ~ 4194851 (+)
LOC122327476 LOC107704490,LOC107698560 coding upstream 120810 4154246 ~ 4185692 (+)
LOC122327514 NA coding upstream 153176 4147781 ~ 4153326 (+)
LOC122327518 NA coding upstream 161971 4140157 ~ 4144531 (+)
rnasel2 NA coding downstream 9896 4318224 ~ 4319380 (+)
LOC122327422 NA coding downstream 20868 4329196 ~ 4438622 (+)
LOC122327472 LOC107698560 coding downstream 48215 4356543 ~ 4361119 (+)
LOC122327486 NA coding downstream 54812 4363140 ~ 4367796 (+)
LOC122327471 LOC107698560 coding downstream 66477 4374805 ~ 4378735 (+)
G149258 NA non-coding upstream 5603 4298705 ~ 4300899 (+)
G149195 NA non-coding upstream 30983 4268499 ~ 4275519 (+)
G149238 LOC107689434 non-coding upstream 70030 4215345 ~ 4236472 (+)
G149250 LOC107574539,LOC107574896 non-coding upstream 91877 4191840 ~ 4214625 (+)
G149249 NA non-coding upstream 93268 4191243 ~ 4213234 (+)
LOC122327592 LOC107737287 non-coding downstream 121 4308449 ~ 4312101 (+)
G149274 LOC107698552,LOC107687331,LOC107566424,LOC107710492,LOC107755804,LOC107741386,LOC107580752,LOC107711595,LOC107723932 non-coding downstream 22574 4330902 ~ 4503306 (+)
G149263 NA non-coding downstream 36949 4345277 ~ 4371135 (+)
LOC122327602 NA non-coding downstream 119987 4428315 ~ 4429222 (+)
LOC122327608 NA non-coding downstream 125489 4433817 ~ 4435660 (+)
LOC122327447 LOC107741386,LOC107568440 other upstream 65715 4213226 ~ 4240787 (+)
LOC122327446 NA other upstream 247129 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 453131 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 526826 3777580 ~ 3779676 (+)
G148992 NA other upstream 711202 3592661 ~ 3595300 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 111235 4419563 ~ 4421001 (+)
LOC122327412 LOC107698560 other downstream 389864 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 404534 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 683683 4992011 ~ 4998974 (+)
LOC122327529 NA other downstream 795165 5103493 ~ 5107424 (+)

Expression


Co-expression Network