LOC122327518


Basic Information

Item Value
gene id LOC122327518
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4140157 ~ 4144531 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222940.1
GTAACTTACACTAAATGTTGGTTGTAATTGCAACACAGTCTATTGGCAAAACTTCTCTTGTGTAACTTCAGaaggtatatatttttttataatttaattactttatctGTCTATAGAAGTGTGTATGTTAATTGgaagttttttttcatgctaatTCTTTACAGGGGTTTACTTGTATTTCCAATTAAGTATTTTAGTGTTAAAGGAGTCTGTAAAGAAagtatttgaaaacattatcTGTTTTTTGATGGCATGCAACTCTGTGTAAACTTGAGAAACTGtggtttagagaaaaaaaaaagcagaattaGAGTACGGCCCACAGCAGACGTCCTTCATCTCAGGGATAACAGACTCACGGCAGGACTTTACATTTATTCCTTTCTAAACTgctaaagaaaatgtttcactCGTTTGTTTTTCGCTGTTTGTGCTTTTGGCAGCTGGTCGgtgtgtttgctGATTCAGGGACAGTGAAGTCAGTAtcagtgatggagggagattcagtcactctacAATCTGGTCTTACTCAAATACAGGAAAATGATTTGATATACTGGTATTCTGAAGATTCAGGGATTCTAATAGCTCACATTAATAAAGAAGCTGGACACTTCAACATCTTAAACAGACTGGAGCTGGATCATCAGACTGggtctctgaccatcatgaacatcaACATTAAAAACTCTGGACTGTATAATGTAACCATCAGAAGAAACTATTTCATCAATCACCGATTCAATGTCACAGTCTATGCTcgtcttcctgttcctgtcatcAGCAGAGACTCTTCACAGTGTTCATCATCATGTTGTTCATTGTTGTGTTCGGTGGTGAACGTGGGTCACGTGgctctctcctggtacaaaggaaacagtttattgtccaacatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGTGAAGTTTGTCCAGcagttcaCATCAGTTGCTGTGATACAGTTGAAGCTGTCATCCGATTGGTCGCCACTGCTCTGGTGGGCGTGGCCGCTGCAGCTGCTTCTGTTCTCCTGATCAACGACATCAGATCTTCAAGAAGTTAACTAATTACTTCAGCATTTCATTTCACCCTGCTTTTTTGTTCCCTTTTTATTGTTACAGCAACCCCACAAATACAagagtaaaaatatttgttacgGTTTTTAACGAAAGCTGAAAGTATGAAATACCTATGAGtcgcatgcttttattttaattaaagaggCTTTAATTGAACGTAAAACAGCTGTAagcaacatattttaaaaaacgcgAAGACAATATGAATGGACAAATTTCATAAACCTGTTCATTTTGAAGACTTCTcttcctttttgtttctttcacttTATTCTGCTCTTTTTCTCGTGAGATTACACGGACAAAAAAGGGCTGGCTTGACTCGTAATGAATTCGAACTCGATGATATCGGTTATAACTTGGCCAGCTCCTCACATCTTATTTGCTGAGCCGTTGACAAGGTTTGATATAGCGCCACGTCGTCTAACTGGAAAATGCTTTTGTGCGGCCATGAGCGTGCTGATCTTAAAAAACAGGTGTGTTCAGGTGCATTGGTGGCGTTTTGCTGTTTTGAGGACCATAGACCAAGTCAAACACAAAGCTTATTACACACAGGGATGCAAAGCAGCACACAACTAAAGGATTGCAGTGCAATCTTAATATCATTATTGATGTGGCTCTTTAGTAGatcacctagcaaccacacagcacatttatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatatagcaGTAAATTATCCATGCATAATTGCagcttgtaaaaaaatatgcttttttaaatttaaatctgtCACTTGTCTTTGTCCTTGAAATGGACAGATCACTGAAGCTCGTCACAAAAGCGATAGACATGTGGCAAGACGTGTGAAAACTAGTGTTCTGCTCAAACTAACTATTTTCACTCCATACGCGTACTCGCTTACATCAGCAGAAATATTTGCACGGTTTTTCATTTCCGGTGAGACAGTTTAACAGCACTctttcagcaaaaataaaaaaaaaagtgtcacatcaagtgttaaaattgtttttatgctaCATACTGTCACGCGAG
>XM_043222941.1
GTAACTTACACTAAATGTTGGTTGTAATTGCAACACAGTCTATTGGCAAAACTTCTCTTGTGTAACTTCAGaaggtatatatttttttataatttaattactttatctGTCTATAGAAGTGTGTATGTTAATTGgaagttttttttcatgctaatTCTTTACAGGGGTTTACTTGTATTTCCAATTAAGTATTTTAGTGTTAAAGGAGTCTGTAAAGAAagtatttgaaaacattatcTGTTTTTTGATGGCATGCAACTCTGTGTAAACTTGAGAAACTGtggtttagagaaaaaaaaaagcagaattaGAGTACGGCCCACAGCAGACGTCCTTCATCTCAGGGATAACAGACTCACGGCAGGACTTTACATTTATTCCTTTCTAAACTgctaaagaaaatgtttcactCGTTTGTTTTTCGCTGTTTGTGCTTTTGGCAGCTGGTCGgtgtgtttgctGATTCAGGGACAGTGAAGTCAGTAtcagtgatggagggagattcagtcactctacAATCTGGTCTTACTCAAATACAGGAAAATGATTTGATATACTGGTATTCTGAAGATTCAGGGATTCTAATAGCTCACATTAATAAAGAAGCTGGACACTTCAACATCTTAAACAGACTGGAGCTGGATCATCAGACTGggtctctgaccatcatgaacatcaACATTAAAAACTCTGGACTGTATAATGTAACCATCAGAAGAAACTATTTCATCAATCACCGATTCAATGTCACAGTCTATGCTcgtcttcctgttcctgtcatcAGCAGAGACTCTTCACAGTGTTCATCATCATGTTGTTCATTGTTGTGTTCGGTGGTGAACGTGGGTCACGTGgctctctcctggtacaaaggaaacagtttattgtccaacatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaatatcaggataaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGTGAAGTTTGTCCAGttcaCATCAGTTGCTGTGATACAGTTGAAGCTGTCATCCGATTGGTCGCCACTGCTCTGGTGGGCGTGGCCGCTGCAGCTGCTTCTGTTCTCCTGATCAACGACATCAGATCTTCAAGAAGTTAACTAATTACTTCAGCATTTCATTTCACCCTGCTTTTTTGTTCCCTTTTTATTGTTACAGCAACCCCACAAATACAagagtaaaaatatttgttacgGTTTTTAACGAAAGCTGAAAGTATGAAATACCTATGAGtcgcatgcttttattttaattaaagaggCTTTAATTGAACGTAAAACAGCTGTAagcaacatattttaaaaaacgcgAAGACAATATGAATGGACAAATTTCATAAACCTGTTCATTTTGAAGACTTCTcttcctttttgtttctttcacttTATTCTGCTCTTTTTCTCGTGAGATTACACGGACAAAAAAGGGCTGGCTTGACTCGTAATGAATTCGAACTCGATGATATCGGTTATAACTTGGCCAGCTCCTCACATCTTATTTGCTGAGCCGTTGACAAGGTTTGATATAGCGCCACGTCGTCTAACTGGAAAATGCTTTTGTGCGGCCATGAGCGTGCTGATCTTAAAAAACAGGTGTGTTCAGGTGCATTGGTGGCGTTTTGCTGTTTTGAGGACCATAGACCAAGTCAAACACAAAGCTTATTACACACAGGGATGCAAAGCAGCACACAACTAAAGGATTGCAGTGCAATCTTAATATCATTATTGATGTGGCTCTTTAGTAGatcacctagcaaccacacagcacatttatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatatatagcaGTAAATTATCCATGCATAATTGCagcttgtaaaaaaatatgcttttttaaatttaaatctgtCACTTGTCTTTGTCCTTGAAATGGACAGATCACTGAAGCTCGTCACAAAAGCGATAGACATGTGGCAAGACGTGTGAAAACTAGTGTTCTGCTCAAACTAACTATTTTCACTCCATACGCGTACTCGCTTACATCAGCAGAAATATTTGCACGGTTTTTCATTTCCGGTGAGACAGTTTAACAGCACTctttcagcaaaaataaaaaaaaaagtgtcacatcaagtgttaaaattgtttttatgctaCATACTGTCACGCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222940.1 True 2229 mRNA 0.39 4 4140157 4144531
XM_043222941.1 False 2226 mRNA 0.39 4 4140157 4144531

Neighbor

gene id symbol gene type direction distance location
LOC122327450 NA coding upstream 9126 4124031 ~ 4131031 (+)
LOC122327474 NA coding upstream 23649 4112643 ~ 4116508 (+)
LOC122327317 NA coding upstream 27637 4094391 ~ 4112520 (+)
LOC122327467 NA coding upstream 73665 4064468 ~ 4066492 (+)
LOC122328148 NA coding upstream 89718 4048181 ~ 4050439 (+)
LOC122327514 NA coding downstream 3250 4147781 ~ 4153326 (+)
LOC122327476 LOC107704490,LOC107698560 coding downstream 9715 4154246 ~ 4185692 (+)
LOC122327454 NA coding downstream 46602 4191133 ~ 4194851 (+)
LOC122327509 NA coding downstream 135792 4280323 ~ 4287985 (+)
LOC122328151 NA coding downstream 161971 4306502 ~ 4308328 (+)
G149240 NA non-coding upstream 18549 4119531 ~ 4121608 (+)
G149230 NA non-coding upstream 59330 4080283 ~ 4080827 (+)
G149229 NA non-coding upstream 59942 4079643 ~ 4080215 (+)
G149219 NA non-coding upstream 96198 4042503 ~ 4043959 (+)
G149214 LOC107694241 non-coding upstream 127322 3996564 ~ 4012835 (+)
LOC122327587 NA non-coding downstream 30678 4175209 ~ 4176848 (+)
G149235 LOC107687330,LOC107690511,LOC107709401 non-coding downstream 42834 4187365 ~ 4188839 (+)
G149249 NA non-coding downstream 46712 4191243 ~ 4213234 (+)
G149250 LOC107574539,LOC107574896 non-coding downstream 47309 4191840 ~ 4214625 (+)
G149238 LOC107689434 non-coding downstream 70814 4215345 ~ 4236472 (+)
LOC122327446 NA other upstream 80784 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 286786 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 360481 3777580 ~ 3779676 (+)
G148992 NA other upstream 544857 3592661 ~ 3595300 (+)
G149028 NA other upstream 565684 3571093 ~ 3574473 (+)
LOC122327447 LOC107741386,LOC107568440 other downstream 68695 4213226 ~ 4240787 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 275032 4419563 ~ 4421001 (+)
LOC122327412 LOC107698560 other downstream 553661 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 568331 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 847480 4992011 ~ 4998974 (+)

Expression


Co-expression Network