Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC122327474 |
| gene name | NA |
| gene type | coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056720.1 |
| NCBI id | CM032089.1 |
| chromosome length | 18002998 |
| location | 4112643 ~ 4116508 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| id | name | namespace |
|---|---|---|
| GO:0045088 | regulation of innate immune response | biological_process |
| GO:0045089 | positive regulation of innate immune response | biological_process |
| GO:0002253 | activation of immune response | biological_process |
| GO:0031349 | positive regulation of defense response | biological_process |
| GO:0002218 | activation of innate immune response | biological_process |
| GO:0002221 | pattern recognition receptor signaling pathway | biological_process |
| GO:0002757 | immune response-activating signal transduction | biological_process |
| GO:0002758 | innate immune response-activating signal transduction | biological_process |
| GO:0002764 | immune response-regulating signaling pathway | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_043222865.1 | True | 1529 | mRNA | 0.41 | 4 | 4112643 | 4116508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC122327317 | NA | coding | upstream | 123 | 4094391 ~ 4112520 (+) |
| LOC122327467 | NA | coding | upstream | 46151 | 4064468 ~ 4066492 (+) |
| LOC122328148 | NA | coding | upstream | 62204 | 4048181 ~ 4050439 (+) |
| LOC122327441 | LOC107741386 | coding | upstream | 119698 | 3971398 ~ 3992945 (+) |
| LOC122327394 | NA | coding | upstream | 281976 | 3821995 ~ 3830667 (+) |
| LOC122327450 | NA | coding | downstream | 7523 | 4124031 ~ 4131031 (+) |
| LOC122327518 | NA | coding | downstream | 23649 | 4140157 ~ 4144531 (+) |
| LOC122327514 | NA | coding | downstream | 31273 | 4147781 ~ 4153326 (+) |
| LOC122327476 | LOC107704490,LOC107698560 | coding | downstream | 37738 | 4154246 ~ 4185692 (+) |
| LOC122327454 | NA | coding | downstream | 74625 | 4191133 ~ 4194851 (+) |
| G149230 | NA | non-coding | upstream | 31816 | 4080283 ~ 4080827 (+) |
| G149229 | NA | non-coding | upstream | 32428 | 4079643 ~ 4080215 (+) |
| G149219 | NA | non-coding | upstream | 68684 | 4042503 ~ 4043959 (+) |
| G149211 | NA | non-coding | upstream | 72932 | 3975925 ~ 4039711 (+) |
| G149240 | NA | non-coding | downstream | 3023 | 4119531 ~ 4121608 (+) |
| LOC122327587 | NA | non-coding | downstream | 58701 | 4175209 ~ 4176848 (+) |
| G149235 | LOC107687330,LOC107690511,LOC107709401 | non-coding | downstream | 70857 | 4187365 ~ 4188839 (+) |
| G149249 | NA | non-coding | downstream | 74735 | 4191243 ~ 4213234 (+) |
| G149250 | LOC107574539,LOC107574896 | non-coding | downstream | 75332 | 4191840 ~ 4214625 (+) |
| LOC122327446 | NA | other | upstream | 53270 | 4053527 ~ 4059373 (+) |
| G149157 | LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 | other | upstream | 259272 | 3852063 ~ 3853371 (+) |
| LOC122328138 | NA | other | upstream | 332967 | 3777580 ~ 3779676 (+) |
| G148992 | NA | other | upstream | 517343 | 3592661 ~ 3595300 (+) |
| G149028 | NA | other | upstream | 538170 | 3571093 ~ 3574473 (+) |
| LOC122327447 | LOC107741386,LOC107568440 | other | downstream | 96718 | 4213226 ~ 4240787 (+) |
| LOC122327552 | LOC107568440,LOC107698560 | other | downstream | 303055 | 4419563 ~ 4421001 (+) |
| LOC122327412 | LOC107698560 | other | downstream | 581684 | 4698192 ~ 4730700 (+) |
| LOC122327517 | NA | other | downstream | 596354 | 4712862 ~ 4716003 (+) |
| LOC122328161 | NA | other | downstream | 875503 | 4992011 ~ 4998974 (+) |
