Gene
RNA
| Item | Value |
|---|---|
| gene id | G149230 |
| gene name | NA |
| gene type | non-coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056720.1 |
| NCBI id | CM032089.1 |
| chromosome length | 18002998 |
| location | 4080283 ~ 4080827 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004520 | endodeoxyribonuclease activity | molecular_function |
| GO:0004536 | deoxyribonuclease activity | molecular_function |
| id | description |
|---|---|
| ko04142 | Lysosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU220753 | True | 545 | lncRNA | 0.48 | 1 | 4080283 | 4080827 |
| TU220755 | False | 418 | lncRNA | 0.50 | 1 | 4080410 | 4080827 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC122327467 | NA | coding | upstream | 13791 | 4064468 ~ 4066492 (+) |
| LOC122328148 | NA | coding | upstream | 29844 | 4048181 ~ 4050439 (+) |
| LOC122327441 | LOC107741386 | coding | upstream | 87338 | 3971398 ~ 3992945 (+) |
| LOC122327394 | NA | coding | upstream | 249616 | 3821995 ~ 3830667 (+) |
| LOC122328141 | NA | coding | upstream | 267242 | 3810802 ~ 3813041 (+) |
| LOC122327317 | NA | coding | downstream | 13564 | 4094391 ~ 4112520 (+) |
| LOC122327474 | NA | coding | downstream | 31816 | 4112643 ~ 4116508 (+) |
| LOC122327450 | NA | coding | downstream | 43204 | 4124031 ~ 4131031 (+) |
| LOC122327518 | NA | coding | downstream | 59330 | 4140157 ~ 4144531 (+) |
| LOC122327514 | NA | coding | downstream | 66954 | 4147781 ~ 4153326 (+) |
| G149229 | NA | non-coding | upstream | 68 | 4079643 ~ 4080215 (+) |
| G149219 | NA | non-coding | upstream | 36324 | 4042503 ~ 4043959 (+) |
| G149211 | NA | non-coding | upstream | 40572 | 3975925 ~ 4039711 (+) |
| G149214 | LOC107694241 | non-coding | upstream | 67448 | 3996564 ~ 4012835 (+) |
| G149206 | NA | non-coding | upstream | 92566 | 3961459 ~ 3987717 (+) |
| G149240 | NA | non-coding | downstream | 38704 | 4119531 ~ 4121608 (+) |
| LOC122327587 | NA | non-coding | downstream | 94382 | 4175209 ~ 4176848 (+) |
| G149235 | LOC107687330,LOC107690511,LOC107709401 | non-coding | downstream | 106538 | 4187365 ~ 4188839 (+) |
| G149249 | NA | non-coding | downstream | 110416 | 4191243 ~ 4213234 (+) |
| G149250 | LOC107574539,LOC107574896 | non-coding | downstream | 111013 | 4191840 ~ 4214625 (+) |
| LOC122327446 | NA | other | upstream | 20910 | 4053527 ~ 4059373 (+) |
| G149157 | LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 | other | upstream | 226912 | 3852063 ~ 3853371 (+) |
| LOC122328138 | NA | other | upstream | 300607 | 3777580 ~ 3779676 (+) |
| G148992 | NA | other | upstream | 484983 | 3592661 ~ 3595300 (+) |
| G149028 | NA | other | upstream | 505810 | 3571093 ~ 3574473 (+) |
| LOC122327447 | LOC107741386,LOC107568440 | other | downstream | 132399 | 4213226 ~ 4240787 (+) |
| LOC122327552 | LOC107568440,LOC107698560 | other | downstream | 338736 | 4419563 ~ 4421001 (+) |
| LOC122327412 | LOC107698560 | other | downstream | 617365 | 4698192 ~ 4730700 (+) |
| LOC122327517 | NA | other | downstream | 632035 | 4712862 ~ 4716003 (+) |
| LOC122328161 | NA | other | downstream | 911184 | 4992011 ~ 4998974 (+) |
