G149250 (LOC107574539,LOC107574896)


Basic Information

Item Value
gene id G149250
gene name LOC107574539,LOC107574896
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 4191840 ~ 4214625 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU220798
CAGTGCTACTGTatatgatgatgttcttgaTGAGAGATttagagacagactgaagctggatcatcaaactggatctctgatCATCACTAACATCTCAACTCTACACACTGGAGAATATCAACTACAGACCAGCAGTGTGAGAAAGAGCTTCAGTGTCTCTGTCTACGCTCatcttcctgttcctgtcatcATCAGTAACTCTTCACAatgttcttcatcatcatcatcaaattGTTCGTTGTTGTGTTCGGTGGTGAACgtgggtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacaTCAGGAgaaaaacacctacagctgtgtgatcaacaaccccatcagaaaccagaccacacatctgAACATCAGTCAGCTCTGTCAGACGTGTTCAGG

Function

NR:

description
PREDICTED: SLAM family member 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220798 True 459 lncRNA 0.44 3 4191840 4214625

Neighbor

gene id symbol gene type direction distance location
LOC122327476 LOC107704490,LOC107698560 coding upstream 6148 4154246 ~ 4185692 (+)
LOC122327514 NA coding upstream 38514 4147781 ~ 4153326 (+)
LOC122327518 NA coding upstream 47309 4140157 ~ 4144531 (+)
LOC122327450 NA coding upstream 60809 4124031 ~ 4131031 (+)
LOC122327474 NA coding upstream 75332 4112643 ~ 4116508 (+)
LOC122327509 NA coding downstream 65698 4280323 ~ 4287985 (+)
LOC122328151 NA coding downstream 91877 4306502 ~ 4308328 (+)
rnasel2 NA coding downstream 103599 4318224 ~ 4319380 (+)
LOC122327422 NA coding downstream 114571 4329196 ~ 4438622 (+)
LOC122327472 LOC107698560 coding downstream 141918 4356543 ~ 4361119 (+)
G149235 LOC107687330,LOC107690511,LOC107709401 non-coding upstream 3001 4187365 ~ 4188839 (+)
LOC122327587 NA non-coding upstream 14992 4175209 ~ 4176848 (+)
G149240 NA non-coding upstream 70232 4119531 ~ 4121608 (+)
G149230 NA non-coding upstream 111013 4080283 ~ 4080827 (+)
G149229 NA non-coding upstream 111625 4079643 ~ 4080215 (+)
G149238 LOC107689434 non-coding downstream 720 4215345 ~ 4236472 (+)
G149195 NA non-coding downstream 53874 4268499 ~ 4275519 (+)
G149266 NA non-coding downstream 67886 4282511 ~ 4377347 (+)
G149258 NA non-coding downstream 84080 4298705 ~ 4300899 (+)
LOC122327592 LOC107737287 non-coding downstream 93824 4308449 ~ 4312101 (+)
LOC122327446 NA other upstream 132467 4053527 ~ 4059373 (+)
G149157 LOC107561598,LOC107717161,LOC107549384,LOC107742789,LOC107704500 other upstream 338469 3852063 ~ 3853371 (+)
LOC122328138 NA other upstream 412164 3777580 ~ 3779676 (+)
G148992 NA other upstream 596540 3592661 ~ 3595300 (+)
G149028 NA other upstream 617367 3571093 ~ 3574473 (+)
LOC122327552 LOC107568440,LOC107698560 other downstream 204938 4419563 ~ 4421001 (+)
LOC122327412 LOC107698560 other downstream 483567 4698192 ~ 4730700 (+)
LOC122327517 NA other downstream 498237 4712862 ~ 4716003 (+)
LOC122328161 NA other downstream 777386 4992011 ~ 4998974 (+)
LOC122327529 NA other downstream 888868 5103493 ~ 5107424 (+)

Expression


Co-expression Network