LOC122327440


Basic Information

Item Value
gene id LOC122327440
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5380181 ~ 5383399 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222806.1
CACCGCCTTTTTTTAAGTAGGGTTTCTCTATAGGAGCCCTGAATACTATTCTCAGAAATGTCTCGGTTAAGGCTTTCACGCTGTTTTGGCTTTTAACGAAAATGGCGTTTCgtgcatttttctgtatttgcCTGTGGCTTTTGTGTGGTTTGTGTGGTGTTTATACAGAAGAAACGGTGATATCAGTGACTGAGGGAGagtctgtcactttaaatactGGTGTTACTGAACTACACAAAGATGATAAGATACTGTGGTCGTTTATACTTAACAGTTCAGAGATTGGTTTAGCTGCAATCTTTAATCAGATACTCTCTATATATGATGATAAAGAGAATAATGAGAGATTCAGAGGCAGACTACAGCTAGATGAACAGAcgggatctctgaccatcacaaaCATCAACAGATTACACTCTGGACTTTATAAACTAACGATCATCAGTGGAGTGATTAAACACAAGAGCTTTAGTACTGAAGTCTATGGTATTCTGCCTGTTCCTGTCATTATCAGAGACTCTTTAATAAATCTTTCAACATCAGGATCATCAGTGTCCAGATGTTCACTGCTGTGTTCGGTGGTGAACGtgagtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggaggtggaacaTCAGGAgaaaaacacctacagctgtgtgatcaacaaccccatcagaaaccacACTCAACATCTGGACATCAGTCAACTCTGTCAGACAAGTCCAGAATCCAGCCGAACTTTAGTTCTCATCGTTGtgtttctgctgctgtttcTTCTTGTGGTCGTGGTTGTAGTCGTCTGGATGTTTGGTCGCCGTAGGACATACACACGAGCAAAACAAGATGCTCAGGACAATGAAGAAGAGGTTGACTATACAGATGCAACTTTTATTCCACACAGAGCTCTGGATGCTGATGCTAAAGGACGCAATCAGACGGTGTATTCAGAAGTGGCTTTGAGGCGATGATCATATAGACGGCGTTATCACACGGCTCAGTTTGTTACAGGACAGAAATGAGActgaatttcatttcattttatgtaatttctcatttttaaaaacaaagatctCATATCTGGAACACACACAGTCGGTAAAAGGATATATCACTTATTTCagggactatatatatatatatgtgtgtgtgtgagtacgaTTAAAATGAACGTGTTCATTACTGCACTGGGCTAATGGCTCCCTCTGCAGACTGTTTTTGAGACTTCTATGAATCAATGGCTCTTGGCTGGTAGATAACCAACTTTGGGACAAAAATCATCTTTCAAAAGTTTAGAATAACTTCCTTTGATAAGCAACACCCCTGCTCTGAAGATAAGACCATTAATACAagtcatttttactttaatgttgCCAGCATTcgaagtttttatttttctgaagaaaggCGTGGCGATGTAAAACATAGTAAAAAGTGCACTATTTAACAGGTTTTGCAACAGTTATCAGTATTATCTATGCCTGTGTAAAGTGGTTGATTTATTGAAATTTGATTCTGTTCTGACAAACCAGGTGATTTAATATGACTGATGATTTGAGTTTTCTCTATTCAAATTGTTTGAATGTAGTAATCTTGTAATGAAGTGAAGTCACTGAAGTCTATGGCTTTTTTCATGTTTGATATTTAGGctctttatataataaacattataaatgaaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222806.1 True 1739 mRNA 0.38 6 5380181 5383399

Neighbor

gene id symbol gene type direction distance location
strip1 strip1,LOC107655420,LOC107754611,LOC107653179,LOC107570607 coding upstream 61427 5310533 ~ 5318754 (+)
cacna2d2b cacna2d2b,LOC107655410,LOC107720977 coding upstream 72640 5284804 ~ 5307541 (+)
LOC122327433 NA coding upstream 101331 5271687 ~ 5278850 (+)
LOC122328167 NA coding upstream 108842 5248190 ~ 5271339 (+)
LOC122327557 LOC107749583 coding upstream 132180 5245020 ~ 5248001 (+)
LOC122328169 NA coding downstream 1658 5385057 ~ 5394900 (+)
LOC122327507 NA coding downstream 15288 5398687 ~ 5399879 (+)
LOC122327443 LOC107754875,LOC107694203 coding downstream 21067 5404466 ~ 5409346 (+)
LOC122327431 LOC107586973 coding downstream 40617 5424016 ~ 5428346 (+)
LOC122327385 NA coding downstream 62301 5445700 ~ 5449931 (+)
G149641 NA non-coding upstream 305553 5073993 ~ 5074628 (+)
G149627 NA non-coding upstream 310181 4973734 ~ 5070000 (+)
G149624 LOC107720998,LOC107653181 non-coding upstream 397995 4944699 ~ 4982186 (+)
G149615 NA non-coding upstream 578104 4798640 ~ 4802077 (+)
G149400 gpd1b,LOC107721242,LOC107727040,LOC107698578,LOC107566434 non-coding upstream 603000 4773476 ~ 4777181 (+)
G149720 NA non-coding downstream 53438 5436837 ~ 5438435 (+)
G149729 NA non-coding downstream 102942 5486341 ~ 5494990 (+)
G149733 NA non-coding downstream 148466 5531865 ~ 5532831 (+)
G149762 NA non-coding downstream 226398 5609797 ~ 5610816 (+)
G149786 NA non-coding downstream 270284 5653683 ~ 5653887 (+)
LOC122327380 NA other upstream 175817 5186190 ~ 5204364 (+)
LOC122327529 NA other upstream 272757 5103493 ~ 5107424 (+)
G149646 NA other upstream 275745 5103529 ~ 5104436 (+)
LOC122328161 NA other upstream 381207 4992011 ~ 4998974 (+)
LOC122327517 NA other upstream 664178 4712862 ~ 4716003 (+)
LOC122327428 NA other downstream 69766 5453165 ~ 5457356 (+)
LOC122327321 NA other downstream 351009 5734408 ~ 5745051 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other downstream 388936 5772335 ~ 5789390 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other downstream 420327 5803726 ~ 5806623 (+)
hyal2b hyal2b,LOC107695624,LOC107756016,LOC107586928,LOC107704436,LOC107593055 other downstream 427079 5810478 ~ 5824102 (+)

Expression


Co-expression Network