LOC122327443 (LOC107754875,LOC107694203)


Basic Information

Item Value
gene id LOC122327443
gene name LOC107754875,LOC107694203
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5404466 ~ 5409346 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222809.1
TCTTTGGGTCCGAATAATGCTCAGGTCCTTGAAAATGAagattccaaaataaaagttacattCTAAGATACCATCTTTAATATCGTTTCTGTTATAAGCGCTCTAACTCAAACGAAGTATTTTACTAGGACGCCCAAAGCACGTGGTGCACGCAAAACAGCCACAAGCTGTTCTGGGGAGTTTATCGTTATATTCCTGGAGACTGTGTTACCTCTTCCGTTTTACGGCTTATGTTTTTTCTGCACATGGCAAAGCGCGAGTCTGTCTGGTCGCTTCGCAATTGTTCCGTTCGCGTCGTTAAAGAAGATGTTTTACGCATTTCTCTGTTTCTTCTTATGGCTGTTCAGCGGTGTGTCTGGTGATGAAACAGATGAAACGGAGACTATATCAGTGATGGAGGGGGATTCTGTTACTCTACGCACTAATGTTACTGAAATACACAAAGATGATCATATAATCTGGACATTTAGGCTTAAAAATTCGGAGAATCGTTTagctgtcatttttaatcagatACTCTCTATATATGTTGATAAAGAGAATAATGAGAGATTCAGAGGCAGACTACAGCTAGATGAACAGAcgggatctctgaccatcacaaaCATCAACAGATTACACTCTGGACTTTATAAACTACAGGTCATGAATGGAGAGGTCAAACACAAGAGCTTCAATCTAGCCGTTTATGCTCTTCTGACTGTTCCTGAGATCAGCGATTCTCCTCAAAACCCTTCGGTATCAGAAAAACCTTCAAGTCAGAATTGTTCGCTGCTGTGTTCGGCGGTGAACGtgagtcatgtgactctctcctggtacaaaggaaacagtttattgtccagcatcagtgtgtctgatctcagcatcagtctctctctacctctggagaTTGAGTGTCTGGATGATTCATACAGCTGTGTTGTTGCTTATTCATTCATCAAACAGACTAAACACCTCAACGTCACTCAGCTCTGTCGGCCATGTTCAGATGGTTCACGTGTGCCCTTTAAAGCTGTAATAGCTGtatttctgctgctgctgctagtGATCTCAGCTTCAGCCGTGTGGATATTCTGTCGCCGCAGGAGCCACAGAGCAGCAGTACAAGAAACTGGAACTACTGCGGAAGAGGTGGAGTACACTGATGCGATATTAACTACCAACAGAGGTCAAGATTTGGAGACTACTGGAAAGAACCAGACAGAGTATTCAGAGGTTGCGTTCAGATGATGATCATTCAGACTGTATTATTATACGTCTTATTACAGGGCAGAATGTCAGTAGGCTATTTGGCAAAGCATCAAGTCTCATAGTTGAACGATGCTAAGGGCTCGATGATGGAGGTGGGCCCCCGAGGAGGAAACGTGGCTTCTACTCAGGGGGGCCACCGGAGCGCGTTTGGACCGCAATCGTGTTTTCTACAGGGGTAGAACACGATTCTGAGGGGTAGCCTGAGTGGACAGGGGGTCCAGAAACCATAGCAGTGCccctgaataataaaaacaaacataaaagtgAAGTAGCAGCCCCTCAGAGACCACTTgcgcacacaaaacacaaataaagccCAGGCCTGGTCCTCTCTCCTGGCCTTCAACTGTTGTTGCTCTGACTTGAGGCGCAGGTGTTGTTTATTACCATTTAACTCCAACTCTAATAGATCACAAATTGTCCCTGAAGcctttgaagttttttttatattggttTCCTTGTGTACAGTTTGAGCAATAATGTGAACATGAGTTCCAATAAAGGCTCCAACAACTTTAAGAAAGCCCACAGTACTCATAAAAACTACTAATCTAATCTAGTAGACGAATCTAATTTGTAGTTCTGATGCGTTCTGAATTAAGTTTGTCTTTACTAGgatattctttttaattctgagaacattttgtcatcttaACACCAAGAATTTTCATGACTATGTGCCAGAAGTATTCACAACAGACAAGTGATGTGCCATTAATTTCTGGTCTCTTGTCTGCATCTGCGCAGGTTCATACCTTACAATGTGTAAATGTGTCTAGACTTGGTTTTAGGTTGTTTATATATCCATATGATTGCTAGACTAGAATGTCTTAATAAAGTCATCATAACCAGAACAAAAATAGACCAAAACAAGTAAGGAGGGTCAGAAAAAGGTCATTCCAGGATCTAGCTTGGACACCCTTGCCTCTGCTGACTATCTGTGAGTTTTACATGTAGTAAGATCAGGTCTGCCTATGCTGGTAGATAGTACAATTCTCCTTATATTCTCCTTCTCACAAAACGGTTTAGAAAGTAGCATCTgttatcagtttgtttttttaggctCCTAATCAAGTTATTGgaagaaaacataatttcttGTATCTGTTCTTCGTTTCACACACATCTTAAAGAATATGTCGAAATCTACTGTTTTCAGTTGTGTGTTTGTCACAAATTGTATgtgatttcattttagtttttacttttactgaaTTCAGATTTTACagaattcatataaaaaaacaaggCTCAACTTTTTTACAAGTTTGGCTTGTTTAGTGataaatgtgattatttccTTAAGATTAATCTGCATTAAACAATGTTTGCttttctgaagaaacaaacattataagcaaaaataatttacGATAAACCTAAACTTAGCAttgaacatcttttttttttaagaatattgaTCACTCCTGTATACTGTACagacatacagtacatttatgcCAGCATTATTATCCATTTTGATGCCAGATATTCCACTGAATGGCAGAAAACAGAACATactgaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC107754875

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222809.1 True 2776 mRNA 0.40 6 5404466 5409346

Neighbor

gene id symbol gene type direction distance location
LOC122327507 NA coding upstream 4587 5398687 ~ 5399879 (+)
LOC122328169 NA coding upstream 9566 5385057 ~ 5394900 (+)
LOC122327440 NA coding upstream 21067 5380181 ~ 5383399 (+)
strip1 strip1,LOC107655420,LOC107754611,LOC107653179,LOC107570607 coding upstream 85712 5310533 ~ 5318754 (+)
cacna2d2b cacna2d2b,LOC107655410,LOC107720977 coding upstream 96925 5284804 ~ 5307541 (+)
LOC122327431 LOC107586973 coding downstream 14670 5424016 ~ 5428346 (+)
LOC122327385 NA coding downstream 36354 5445700 ~ 5449931 (+)
LOC122327309 LOC107653162,LOC107720973,LOC107676138,LOC107574024 coding downstream 50114 5459460 ~ 5467046 (+)
LOC122327391 LOC107653181,LOC107741386 coding downstream 57953 5467299 ~ 5471486 (+)
LOC122327430 NA coding downstream 86859 5496205 ~ 5499658 (+)
G149641 NA non-coding upstream 329838 5073993 ~ 5074628 (+)
G149627 NA non-coding upstream 334466 4973734 ~ 5070000 (+)
G149624 LOC107720998,LOC107653181 non-coding upstream 422280 4944699 ~ 4982186 (+)
G149615 NA non-coding upstream 602389 4798640 ~ 4802077 (+)
G149400 gpd1b,LOC107721242,LOC107727040,LOC107698578,LOC107566434 non-coding upstream 627285 4773476 ~ 4777181 (+)
G149720 NA non-coding downstream 27491 5436837 ~ 5438435 (+)
G149729 NA non-coding downstream 76995 5486341 ~ 5494990 (+)
G149733 NA non-coding downstream 122519 5531865 ~ 5532831 (+)
G149762 NA non-coding downstream 200451 5609797 ~ 5610816 (+)
G149786 NA non-coding downstream 244337 5653683 ~ 5653887 (+)
LOC122327380 NA other upstream 200102 5186190 ~ 5204364 (+)
LOC122327529 NA other upstream 297042 5103493 ~ 5107424 (+)
G149646 NA other upstream 300030 5103529 ~ 5104436 (+)
LOC122328161 NA other upstream 405492 4992011 ~ 4998974 (+)
LOC122327517 NA other upstream 688463 4712862 ~ 4716003 (+)
LOC122327428 NA other downstream 43819 5453165 ~ 5457356 (+)
LOC122327321 NA other downstream 325062 5734408 ~ 5745051 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other downstream 362989 5772335 ~ 5789390 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other downstream 394380 5803726 ~ 5806623 (+)
hyal2b hyal2b,LOC107695624,LOC107756016,LOC107586928,LOC107704436,LOC107593055 other downstream 401132 5810478 ~ 5824102 (+)

Expression


Co-expression Network