G149729


Basic Information

Item Value
gene id G149729
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5486341 ~ 5494990 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU221556
tctgaGATAATGAGTGGATTAATTGTTCTAATAATCTTTGATTAATCAGTGACCAacatgactgacagacagacatgcatttttatgactgGATAGAGAAGAGAAATGAGTGAAGCTCCTCCCGCACTCATCACACGCGTAcagcttctctccggtgtggaccCTCTCGTGTATCTGTAGATACGCTGATCGTTTGAATCTCTTGccacagtgtgaacacttgaAAGGCGTTTCTGTAGAGTGAACTGTGTGATGCACCTTCAGAGCACTTTCTGTAACAAAAGTCTTCCCACATTCAGAGCAAGCGTGATCCTTCACGCCGCTGTGTCTTTTCTGGTGTATCTTTAAAGCACACATCTGcctgaaactctttccacacaaaGAACACACGTAAGGCTTCTCCTTTGTATGAACTGTCAGGTGGTCCTTCAAGTAATCGGGCCTAAAAAACTTTTTACCGCACTGGTCACAGCTATACAGCCTTTCTCTAGAATGAGTAAGCAGATGTACTTTATAAACACTTGATTGtctgaaactcttcccgcactgatcacaaGTGTACGGCTTTTCTCCGGTGTGGACTTTCATGTGGAAATTAAGGGCTCCTCTTCGCGAGTAAttcttcccgcactgatcacacgTGTGccgcttctctccggtgtggattgTCATGTGATTATTAAGGTTTGTTTTATGCGCGAAACacttcccgcactgatcacacgtgtgcggtttctctccggtgtggattttTACGTGTTTGTTGAGGTTGCTTTTAACCGAGAAcctcttcccgcactgatcgCATGagaacggcttctctccggtgtggactTTCAGGTGATCGTTAAGGTTTCCTTTTTTGGAAAAACCCTTCCCGCACCGATCACACGTGTGCGGTTTCTCTGCGGTGTGGATTTTCATGTGTTCGGTTAGGTTTTCTTTTATTGCGAAAATCTCACCGCACTGCTCACAAGCATACAGCGTCCCCCCACTGTGACATTTTATGTGAAGGTCCAGATTTTGCTTGCATgagaaactctttccacactgagggtAAGTGAAACATGTATTGTCGTTTTTCAGTGAAGGGCTCCAGGATGTTTCTTCAGTCTTGACATGATGTTTCTCCCCCTCTTCAATGAGTGCTTCAGTCTCCTTGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221556 True 1166 lncRNA 0.45 2 5486341 5494990

Neighbor

gene id symbol gene type direction distance location
LOC122327391 LOC107653181,LOC107741386 coding upstream 14855 5467299 ~ 5471486 (+)
LOC122327309 LOC107653162,LOC107720973,LOC107676138,LOC107574024 coding upstream 19295 5459460 ~ 5467046 (+)
LOC122327385 NA coding upstream 36410 5445700 ~ 5449931 (+)
LOC122327431 LOC107586973 coding upstream 57995 5424016 ~ 5428346 (+)
LOC122327443 LOC107754875,LOC107694203 coding upstream 76995 5404466 ~ 5409346 (+)
LOC122327430 NA coding downstream 1215 5496205 ~ 5499658 (+)
LOC122328172 NA coding downstream 8779 5503769 ~ 5514001 (+)
LOC122327438 NA coding downstream 23879 5518869 ~ 5522710 (+)
tbc1d20 tbc1d20,LOC107658381,LOC107653176,LOC107573569,LOC107586998 coding downstream 47437 5542427 ~ 5550554 (+)
rpp14 LOC107653175,LOC107720992,LOC107745405 coding downstream 63919 5558909 ~ 5560335 (+)
G149720 NA non-coding upstream 47906 5436837 ~ 5438435 (+)
G149641 NA non-coding upstream 411713 5073993 ~ 5074628 (+)
G149627 NA non-coding upstream 416341 4973734 ~ 5070000 (+)
G149624 LOC107720998,LOC107653181 non-coding upstream 504155 4944699 ~ 4982186 (+)
G149615 NA non-coding upstream 684264 4798640 ~ 4802077 (+)
G149733 NA non-coding downstream 36875 5531865 ~ 5532831 (+)
G149762 NA non-coding downstream 114807 5609797 ~ 5610816 (+)
G149786 NA non-coding downstream 158693 5653683 ~ 5653887 (+)
G149790 LOC107586918 non-coding downstream 173475 5668465 ~ 5671375 (+)
G149806 NA non-coding downstream 244582 5739572 ~ 5746316 (+)
LOC122327428 NA other upstream 28985 5453165 ~ 5457356 (+)
LOC122327380 NA other upstream 281977 5186190 ~ 5204364 (+)
LOC122327529 NA other upstream 378917 5103493 ~ 5107424 (+)
G149646 NA other upstream 381905 5103529 ~ 5104436 (+)
LOC122328161 NA other upstream 487367 4992011 ~ 4998974 (+)
LOC122327321 NA other downstream 239418 5734408 ~ 5745051 (+)
rad54l2 rad54l2,LOC107756013,LOC107695610,LOC107593093 other downstream 277345 5772335 ~ 5789390 (+)
tusc2b tusc2,tusc2b,LOC107587002,LOC107593101,LOC107695626 other downstream 308736 5803726 ~ 5806623 (+)
hyal2b hyal2b,LOC107695624,LOC107756016,LOC107586928,LOC107704436,LOC107593055 other downstream 315488 5810478 ~ 5824102 (+)
lsm7 lsm7,LOC107593053,LOC107704434 other downstream 352141 5847131 ~ 5848586 (+)

Expression


Co-expression Network