LOC122327980 (wu:fd14a01,LOC108261476,LOC108261437,LOC108254801,LOC106676053)


Basic Information

Item Value
gene id LOC122327980
gene name wu:fd14a01,LOC108261476,LOC108261437,LOC108254801,LOC106676053
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 299388 ~ 301377 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223701.1
CAAAGTTCTAGTTGGATGAACACTAAACTACCTGCCTATCTCCCACAGAATACAAGTCTTATTAACATCAAGAAGAAGCTTGAGGCTGATCTGGTCCAGGTTCAAGGTGAGGTGGATGATGCTGTCCAGGAGGCCAGGAATGCAGAGGAGAAGGCCAAAAAGGCCATCACTGATgctGCCATGATGGCTGAGGAGCTGAAGAAGGAGCAGGACACCAGCGCTGACCtggagaggatgaagaagaaccTGGAGGTGACTGTCAAAGACCTGCAGCACCGTCTGGATGAGGCTGAGAGTCTGGCCATGAAGGGTGGAAAGAAACAACTCCAGAAACTGGAGTCCAGGGTGCGCGAGCTGGAGACTGAAGTTGAAGCTGAGCAGAGACGTGGCGCAGATGCTGTGAAAGGAGTGCGCAAATATGAAAGGAGAGTGAAGGAGCTCACCTACCAGACCGAGGAAGACAAGAAGAATGTGACCCGACTGCAGGATCTGGTAGACAAGCTGCAGCTGAAAGTGAAGGCCTACAAGCGCCAAGCTGAAGAAGCTGAGGAGCAGGCCAACACTCACCTGTCCAGGTACAGGAAGGTGCAGCACGAGATGGAGGAGGCTCAGGAGCGTGCTGACATCGCTGAGTCCCAGGTCAACAAGCTGAGAGCCAAGAGCCGCGACGCTGGGAAGGTAGAAAATAGTTGTGCAGATGTTGTAAAAGtgaacattttattgttgttgaaaTATCTTTACACAATTGTGTCATTTTGTTCTAGAGTAAAGATGAAGAATGAAGACACCACAACAACAAGCAAGCATAAAATATGACTTGTGTTAAGTTTT

Function

NR:

description
myosin heavy chain, fast skeletal muscle

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223701.1 True 831 mRNA 0.49 5 299388 301377

Neighbor

gene id symbol gene type direction distance location
LOC122327912 wu:fd14a01,LOC107575389,LOC107681327,LOC107737926,LOC107571573 coding upstream 274 294512 ~ 299114 (+)
LOC122327903 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573 coding upstream 42937 244947 ~ 256451 (+)
LOC122328015 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC108254796,LOC108443910 coding downstream 20433 321810 ~ 332538 (+)
LOC122327972 ora1,LOC107571576,LOC107704997,LOC107719054 coding downstream 147822 449199 ~ 450821 (+)
LOC122327999 zgc:153713,LOC107705003,LOC108254710,LOC107737929,LOC107681330,LOC105904931,LOC106583462 coding downstream 149451 450828 ~ 453798 (+)
zgc:112334 zgc:112334,LOC107681331,LOC107573142 coding downstream 158545 459922 ~ 470355 (+)
LOC122327927 nckipsd coding downstream 170837 472214 ~ 477199 (+)
LOC122328052 NA non-coding upstream 23154 275879 ~ 276234 (+)
G147829 NA non-coding upstream 213982 29429 ~ 85406 (+)
G147832 NA non-coding upstream 215027 28536 ~ 84361 (+)
G147883 LOC107685875,LOC107741456,LOC107667978,LOC107575420,LOC107561645,LOC107670352,LOC107575457,LOC107727338,LOC107566978 non-coding downstream 69769 371146 ~ 371840 (+)
G147884 NA non-coding downstream 74014 375391 ~ 376324 (+)
LOC122328039 NA non-coding downstream 138060 439437 ~ 442682 (+)
G147897 NA non-coding downstream 156333 457710 ~ 459518 (+)
G147905 NA non-coding downstream 169691 471068 ~ 471545 (+)
G147868 zgc:66156,wu:fd14a01,LOC103138443,LOC103360557,LOC103360549,LOC107705004,LOC107681327,LOC107575389,LOC107571573,LOC108261437,LOC108261476 other downstream 44548 345925 ~ 437345 (+)
G147872 wu:fd14a01,LOC107737926,LOC107681327,LOC107575389,LOC107705004 other downstream 46882 348259 ~ 349180 (+)
G147874 ns:zf-e68,LOC100653413,LOC107737926 other downstream 56551 357928 ~ 358312 (+)
G147885 LOC107575389,LOC107705004,LOC107681327,LOC107571573,LOC106914938,LOC103464607,LOC103138443,LOC108443910 other downstream 121624 423001 ~ 425466 (+)
mfap2 mfap2 other downstream 257627 559004 ~ 564221 (+)

Expression


Co-expression Network