G147897


Basic Information

Item Value
gene id G147897
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 457710 ~ 459518 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU218562
CTTCAGACAGGAAGAGCCTCCCGACCCAAACGTCTGGAGCGACGACCGTCACACTCTCCACCGCCATCGCGCTGACAAAACACACGAACACGTCAGAAACACACCGCGCCGCAGCACTCACACAGCGCACGCCGCTCACCTGGGGTTCATGTGACCAACCTCCTGATCGAAGTGCCTGCTGCTGACGACCTCCGGCTTCCACTCGGTGTCTGCAAGAAACACACGCTCCGTGAGAAGCCCACGAGACACGCAGACGAGCGACAGAGGGACACTCACTGTATGTAGCACGTAACAGCGCACGTGAGCGTGACCTCATTACCTGCGCGGTCCGCAGCAGCCCGGACAGGTGAACCAGACGACCGTCGTTCTGAGGGTCTAGCGTCATATCCGGGTGAAGAGACACGACCTGATTGAGACCCTCATCCAGAGACGTGGCCGTGCGCAGAGCGCGCCCCTGCAGACACAGATGATTGACAGATGGATGCTCCGCCTTACTGATCGATCGATCGAGTTATCGATCGGGTCTCACCTCATTCGTGAAGAGCACGTATAAAGAGAGCGCGAACAGACAGACGCCCGCGACCACGCCGCCCGCGCTCGCGCTCACACGCTCCAGGAAGCCGGGAGCGCGCTTGTGCTGTTCACCTGAGAACTGACAGACAGCGTTATCATTAGTACGACAGCGCGCGGATCTTTTAACGACAGATCAGTACGACTTACTGCTTCAGTCATTCTGTGTGCTGCAGGAACTCATCAACTCCGGGGAAGAAACTCTGTAACTTCAGCAACTCTGCCGGAAACAGCGGCTACAGTTCTGTTCCTGGTTAAACCGTCGCTTTGAAACGGCCCTGTGATGTGAGAAAGCGCGAAAATGACTAAACTTGACTGGCTAAACGAGTCCAGGAAGTTTCTGGCGCGCAGCATGCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218562 True 930 lncRNA 0.57 2 457710 459518

Neighbor

gene id symbol gene type direction distance location
LOC122327999 zgc:153713,LOC107705003,LOC108254710,LOC107737929,LOC107681330,LOC105904931,LOC106583462 coding upstream 3912 450828 ~ 453798 (+)
LOC122327972 ora1,LOC107571576,LOC107704997,LOC107719054 coding upstream 6889 449199 ~ 450821 (+)
LOC122328015 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC108254796,LOC108443910 coding upstream 125172 321810 ~ 332538 (+)
LOC122327906 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC107737926 coding upstream 139601 277092 ~ 318109 (+)
LOC122327980 wu:fd14a01,LOC108261476,LOC108261437,LOC108254801,LOC106676053 coding upstream 156333 299388 ~ 301377 (+)
zgc:112334 zgc:112334,LOC107681331,LOC107573142 coding downstream 404 459922 ~ 470355 (+)
LOC122327927 nckipsd coding downstream 12696 472214 ~ 477199 (+)
slc25a20 slc25a20 coding downstream 17869 477387 ~ 484039 (+)
prkar2ab prkar2a coding downstream 25009 484527 ~ 495149 (+)
sdhb sdhb,LOC107656920,LOC107573137,LOC105927147 coding downstream 96365 555883 ~ 558871 (+)
LOC122328039 NA non-coding upstream 15028 439437 ~ 442682 (+)
G147884 NA non-coding upstream 81386 375391 ~ 376324 (+)
G147883 LOC107685875,LOC107741456,LOC107667978,LOC107575420,LOC107561645,LOC107670352,LOC107575457,LOC107727338,LOC107566978 non-coding upstream 85870 371146 ~ 371840 (+)
LOC122328052 NA non-coding upstream 181476 275879 ~ 276234 (+)
G147829 NA non-coding upstream 372304 29429 ~ 85406 (+)
G147905 NA non-coding downstream 11550 471068 ~ 471545 (+)
G147891 spen,LOC107571566,LOC107719036 non-coding downstream 38207 497725 ~ 729074 (+)
G147939 NA non-coding downstream 62941 522459 ~ 522722 (+)
G147942 slc25a34 non-coding downstream 71049 530567 ~ 531534 (+)
G147923 NA non-coding downstream 93428 552946 ~ 553698 (+)
G147868 zgc:66156,wu:fd14a01,LOC103138443,LOC103360557,LOC103360549,LOC107705004,LOC107681327,LOC107575389,LOC107571573,LOC108261437,LOC108261476 other upstream 20365 345925 ~ 437345 (+)
mfap2 mfap2 other downstream 99486 559004 ~ 564221 (+)
G147956 NA other downstream 162965 622483 ~ 623367 (+)
G147937 NA other downstream 194362 653880 ~ 659614 (+)
G147896 NA other downstream 266882 726400 ~ 726767 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other downstream 290761 750279 ~ 751509 (+)

Expression


Co-expression Network