LOC122328052


Basic Information

Item Value
gene id LOC122328052
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 275879 ~ 276234 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247767.1
TGCGATGTCTGGAGGAAAGAAGGCAGAGCCGGTCCCTGGAAAAATGCAGGGATCACTGGAGGACCAAATTGTGGCAGCCAACCCTCTGCTGGAGGCTTATGGTAATGCCAAGACTGTGAGGAACGACAACTCCTCTCGTTTTGGTAAATTTATCAGGATTCATAA

Function

GO:

id name namespace
GO:0005516 calmodulin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247767.1 True 165 lncRNA 0.49 3 275879 276234

Neighbor

gene id symbol gene type direction distance location
LOC122327903 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573 coding upstream 19428 244947 ~ 256451 (+)
LOC122327906 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC107737926 coding downstream 858 277092 ~ 318109 (+)
LOC122327912 wu:fd14a01,LOC107575389,LOC107681327,LOC107737926,LOC107571573 coding downstream 18278 294512 ~ 299114 (+)
LOC122327980 wu:fd14a01,LOC108261476,LOC108261437,LOC108254801,LOC106676053 coding downstream 23154 299388 ~ 301377 (+)
LOC122328015 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC108254796,LOC108443910 coding downstream 45576 321810 ~ 332538 (+)
LOC122327972 ora1,LOC107571576,LOC107704997,LOC107719054 coding downstream 172965 449199 ~ 450821 (+)
G147829 NA non-coding upstream 190473 29429 ~ 85406 (+)
G147832 NA non-coding upstream 191518 28536 ~ 84361 (+)
G147883 LOC107685875,LOC107741456,LOC107667978,LOC107575420,LOC107561645,LOC107670352,LOC107575457,LOC107727338,LOC107566978 non-coding downstream 94912 371146 ~ 371840 (+)
G147884 NA non-coding downstream 99157 375391 ~ 376324 (+)
LOC122328039 NA non-coding downstream 163203 439437 ~ 442682 (+)
G147897 NA non-coding downstream 181476 457710 ~ 459518 (+)
G147905 NA non-coding downstream 194834 471068 ~ 471545 (+)
G147868 zgc:66156,wu:fd14a01,LOC103138443,LOC103360557,LOC103360549,LOC107705004,LOC107681327,LOC107575389,LOC107571573,LOC108261437,LOC108261476 other downstream 69691 345925 ~ 437345 (+)
G147872 wu:fd14a01,LOC107737926,LOC107681327,LOC107575389,LOC107705004 other downstream 72025 348259 ~ 349180 (+)
G147874 ns:zf-e68,LOC100653413,LOC107737926 other downstream 81694 357928 ~ 358312 (+)
G147885 LOC107575389,LOC107705004,LOC107681327,LOC107571573,LOC106914938,LOC103464607,LOC103138443,LOC108443910 other downstream 146767 423001 ~ 425466 (+)
mfap2 mfap2 other downstream 282770 559004 ~ 564221 (+)

Expression


Co-expression Network