G147885 (LOC107575389,LOC107705004,LOC107681327,LOC107571573,LOC106914938,LOC103464607,LOC103138443,LOC108443910)


Basic Information

Item Value
gene id G147885
gene name LOC107575389,LOC107705004,LOC107681327,LOC107571573,LOC106914938,LOC103464607,LOC103138443,LOC108443910
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 423001 ~ 425466 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU218544
AAGGACTGACTGGAACTCAAACGTAGCATCTCCTACACCAGACACATCAGAAACATTCTCTCTGGAAACAACAGCAGTAAACCACAATCATGGGAGATGGTGAAATGGAGTGTTTCGGCCCGGCGGCCATTTACCTCCGGAagccagaaagagagagaatcgAGGCTCAGAACACCCCCTTTGATGCCAAAACGGCGTTCTTTGTGACAGAGCAAAGTGAGATGTACCTGAAGGGTACTCTAGCTAGTAGAGAGGGCGGCAAAGCTACTGTCAAAACTCTGTGTGGGAAAACAATCACAGTAAAAGAAGATGAAATCTTCCCATGAATCCTCCAAAGTTTGACAAAATCGAGGACATGGCCATGATGACCCACCTCAATGAGCCTGCTGTGCTGTACAACCTCAAAGAGCGTTACGCAGCATGGATGATCTACACCTACTCTGGCTTGTTCTGCGTCACTGTCAATCCCTACAAGTGGCTGCCGGTGTATGACTCAGTTGTCGTGGCTGGATACAGAGGGAAAAAGAGGATTGAAGCCCCACCTCACATCTTCTCCATCTCTGACAACGCCTATCAGTTCATGCTCACTGGTAAGGAGAATCAATCTATCCTGATTACTGGAGAATCTGGTGCAGGAAAAACTGTCAATACCAAACGTGGTGTCATCCAGTACTTTGCAACAATTGCTGTGTCTGGAGGAAAGAAGGCAGAACCTGTCCCTGGCAAAATGCAGGGGTCGCTAGAGGATCAAATCATTGCAGCCAACCCTCTGCTGGAGGCTTATGGTAATGCCAAGACTGTGAGGAACGACAACTCCTCTCGTTTTG

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218544 True 827 TUCP 0.48 8 423001 425466

Neighbor

gene id symbol gene type direction distance location
LOC122328015 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC108254796,LOC108443910 coding upstream 90463 321810 ~ 332538 (+)
LOC122327906 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573,LOC107737926 coding upstream 104892 277092 ~ 318109 (+)
LOC122327980 wu:fd14a01,LOC108261476,LOC108261437,LOC108254801,LOC106676053 coding upstream 121624 299388 ~ 301377 (+)
LOC122327912 wu:fd14a01,LOC107575389,LOC107681327,LOC107737926,LOC107571573 coding upstream 123887 294512 ~ 299114 (+)
LOC122327903 wu:fd14a01,LOC107575389,LOC107705004,LOC107571573 coding upstream 166550 244947 ~ 256451 (+)
LOC122327972 ora1,LOC107571576,LOC107704997,LOC107719054 coding downstream 23733 449199 ~ 450821 (+)
LOC122327999 zgc:153713,LOC107705003,LOC108254710,LOC107737929,LOC107681330,LOC105904931,LOC106583462 coding downstream 25362 450828 ~ 453798 (+)
zgc:112334 zgc:112334,LOC107681331,LOC107573142 coding downstream 34456 459922 ~ 470355 (+)
LOC122327927 nckipsd coding downstream 46748 472214 ~ 477199 (+)
slc25a20 slc25a20 coding downstream 51921 477387 ~ 484039 (+)
G147884 NA non-coding upstream 46677 375391 ~ 376324 (+)
G147883 LOC107685875,LOC107741456,LOC107667978,LOC107575420,LOC107561645,LOC107670352,LOC107575457,LOC107727338,LOC107566978 non-coding upstream 51161 371146 ~ 371840 (+)
LOC122328052 NA non-coding upstream 146767 275879 ~ 276234 (+)
G147829 NA non-coding upstream 337595 29429 ~ 85406 (+)
G147832 NA non-coding upstream 338640 28536 ~ 84361 (+)
LOC122328039 NA non-coding downstream 13971 439437 ~ 442682 (+)
G147897 NA non-coding downstream 32244 457710 ~ 459518 (+)
G147905 NA non-coding downstream 45602 471068 ~ 471545 (+)
G147891 spen,LOC107571566,LOC107719036 non-coding downstream 72259 497725 ~ 729074 (+)
G147939 NA non-coding downstream 96993 522459 ~ 522722 (+)
G147874 ns:zf-e68,LOC100653413,LOC107737926 other upstream 64689 357928 ~ 358312 (+)
G147872 wu:fd14a01,LOC107737926,LOC107681327,LOC107575389,LOC107705004 other upstream 73821 348259 ~ 349180 (+)
mfap2 mfap2 other downstream 133538 559004 ~ 564221 (+)
G147956 NA other downstream 197017 622483 ~ 623367 (+)
G147937 NA other downstream 228414 653880 ~ 659614 (+)
G147896 NA other downstream 300934 726400 ~ 726767 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other downstream 324813 750279 ~ 751509 (+)

Expression


Co-expression Network