RNA id: TU218544



Basic Information


Item Value
RNA id TU218544
length 827
RNA type TUCP
GC content 0.48
exon number 8
gene id G147885
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 423001 ~ 425466 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAGGACTGACTGGAACTCAAACGTAGCATCTCCTACACCAGACACATCAGAAACATTCTCTCTGGAAACAACAGCAGTAAACCACAATCATGGGAGATGGTGAAATGGAGTGTTTCGGCCCGGCGGCCATTTACCTCCGGAagccagaaagagagagaatcgAGGCTCAGAACACCCCCTTTGATGCCAAAACGGCGTTCTTTGTGACAGAGCAAAGTGAGATGTACCTGAAGGGTACTCTAGCTAGTAGAGAGGGCGGCAAAGCTACTGTCAAAACTCTGTGTGGGAAAACAATCACAGTAAAAGAAGATGAAATCTTCCCATGAATCCTCCAAAGTTTGACAAAATCGAGGACATGGCCATGATGACCCACCTCAATGAGCCTGCTGTGCTGTACAACCTCAAAGAGCGTTACGCAGCATGGATGATCTACACCTACTCTGGCTTGTTCTGCGTCACTGTCAATCCCTACAAGTGGCTGCCGGTGTATGACTCAGTTGTCGTGGCTGGATACAGAGGGAAAAAGAGGATTGAAGCCCCACCTCACATCTTCTCCATCTCTGACAACGCCTATCAGTTCATGCTCACTGGTAAGGAGAATCAATCTATCCTGATTACTGGAGAATCTGGTGCAGGAAAAACTGTCAATACCAAACGTGGTGTCATCCAGTACTTTGCAACAATTGCTGTGTCTGGAGGAAAGAAGGCAGAACCTGTCCCTGGCAAAATGCAGGGGTCGCTAGAGGATCAAATCATTGCAGCCAACCCTCTGCTGGAGGCTTATGGTAATGCCAAGACTGTGAGGAACGACAACTCCTCTCGTTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218514 lncRNA upstream 25334 396545 ~ 397667 (+) False G147868
TU218543 lncRNA upstream 46677 375391 ~ 376324 (+) True G147884
TU218542 lncRNA upstream 51161 371146 ~ 371840 (+) True G147883
XR_006247767.1 lncRNA upstream 146767 275879 ~ 276234 (+) True LOC122328052
TU218452 lncRNA upstream 337595 29429 ~ 85406 (+) True G147829
XR_006247754.1 lncRNA downstream 13971 439437 ~ 442648 (+) True LOC122328039
TU218566 lncRNA downstream 17000 442466 ~ 442682 (+) False LOC122328039
TU218562 lncRNA downstream 32244 457710 ~ 459518 (+) True G147897
TU218573 lncRNA downstream 45602 471068 ~ 471545 (+) True G147905
TU218555 lncRNA downstream 72259 497725 ~ 729074 (+) True G147891
XM_043223742.1 mRNA upstream 90463 321810 ~ 332538 (+) True LOC122328015
XM_043223575.1 mRNA upstream 104892 294061 ~ 318109 (+) False LOC122327906
XM_043223693.1 mRNA downstream 23733 449199 ~ 450821 (+) True LOC122327972
XM_043223721.1 mRNA downstream 25362 450828 ~ 453798 (+) True LOC122327999
XM_043223747.1 mRNA downstream 34456 459922 ~ 470355 (+) True zgc:112334
XM_043223614.1 mRNA downstream 46748 472214 ~ 477199 (+) True LOC122327927
XM_043223694.1 mRNA downstream 51921 477387 ~ 484039 (+) True slc25a20
TU218530 other upstream 64689 357928 ~ 358312 (+) True G147874
TU218528 other upstream 73821 348259 ~ 349180 (+) True G147872
TU218512 other upstream 74824 345925 ~ 348177 (+) True G147868
TU218651 other downstream 197017 622483 ~ 623367 (+) True G147956
TU218610 other downstream 228414 653880 ~ 659614 (+) True G147937
TU218561 other downstream 300934 726400 ~ 726767 (+) True G147896
TU218692 other downstream 324813 750279 ~ 751509 (+) True G147985
TU218551 other downstream 365768 791234 ~ 794006 (+) True G147888

Expression Profile