prkar2ab (prkar2a)


Basic Information

Item Value
gene id prkar2ab
gene name prkar2a
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 484527 ~ 495149 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223686.1
ATGAGCGCCTCGGTTCCGGCGGGTCTGACCGAGCTCCTGAAGGGCTACACGCTGGAGGTGCTGCGGCGGAGACCCGCGGACCTGCTGGAGTTCGCCGTGCTCTACTTCACCCGCCTGCGGGAGCAGCGCAGCTCCAGCCGCCGTTCTCCGGTGACCCGCGGAGAGGCCTTCGACCGGAGCTCCAGCGGCGGAGAGGACGAGGAGGAACAGAGacgagaagaggaggaggaagaagaagaagtaGCTCCTCCACCCAGTAAATGCAACAGACGTGTATcagTGTGTGCGGAGGCGTATAACcctgatgaagatgaagatgagggCAGCGACCAGAGGGTGGTTCATCCTAAAACTGATGCTCAGCGGCAGCGACTACAGGAGGCCTGCAGAGACATACTGCTCTTCAAAACCCTCGAGCAGGATCAGTTCGCTGAGGTGTTGGACAGCATGTTTGAGGTGCTGGTCAAACCGGGCGAGTGTATCATCAATCAGGGCGACGACGGCGATAACTTCTACGTCATAGAGAGGGGTGTGTTTGAGATCGTGATTCAGAAGGACGGCGTGAGTCGATGCGTGGGCTGCTACGATCATAAAGGCAGCTTCGGAGAGCTGGCCCTGATGTACAATACACCACGGGCCGCCACCATCAGGGCCAGCCAGGAGGGGGCGCTGTGGGCGCTGGACAGAGCCACTTTCCACAGACTCATCGTGAAAAATAACGCAAAGAAGAGGAAGATGTACGAGACTTTCATCGAGAGCGCTCCTCTGCTCAAGTCTCTGCAGCTATCGGAGCGCATGAAGATCGTGGACGTGGTTGGGATGAAGACGTTCAGCGATGGCGAGCTAATCATACGTCAGGGAGATTCGGCCGACTGCTTCTACATCGTGGAGTCTGGAGAAGTCAAGATCATGATCCGAAGCAAAACTCAggcaggtcagaggtcacagcgGGAGGTGGAGGTCGCGCGCTGCTCCAGGGGTCAGTATTTCGGCGAGCTGGCGCTGGTCACCAATAAGCCGCGAGCGGCGTCTGTTTACGCAGCAGGAGAGACTAAGTGTTTAGTGATCGACGTGCAGGCCTTCGAGCGTCTGCTGGGCTCCTGTAAGGAGATTCTGAAGAGGAACATCCATCAGTACGAGCAGCAGCTGCTGGCCGTGTTCGGCTCCAGCGTCGACCTCAAACACTGACTGAAGATAGAAGAGGAGCAGAAGACTAGATAGACACCTCACACACTCAGAGATCCTCATTCACCACAAAAAGGTCCTTAAACAtctacaaacttttttttggagtaaaattacttttttagtttgtacttgttttaaaaaagcaaaaacatctgCCAGTGGGGTAAGAAAAACCATCTTCAGCCTTTGGATCTTCTTCCTACACGCTGGCTGAGATCTTTGCTCGTTTTCTGGTCTGAAACAAATGTTATTAGTTTTAGCTAAAAACAAGACCTTACTCCTAAAGTAGTGCTGTCTAGTaataatatccaaaataaagtttgtttacataatgtgtaggGTGTATATTATGatgtcatttaaatacacacaatataaacatacatgtatacatttaaaattctaTAGAACTTAACATTcttgtatattttgtgtgtgtggataaaCATTACAGTGTGTTCACATGTGTTCTATATTAGATGTGATTATTTGACAGCCCTACTCATTTTAAGTGTCaagtaaattaatttgta

Function

symbol description
prkar2a Enables cAMP-dependent protein kinase inhibitor activity; enzyme binding activity; and protein domain specific binding activity. Involved in negative regulation of cAMP-dependent protein kinase activity. Located in centrosome; cytoplasm; and plasma membrane raft. Part of cAMP-dependent protein kinase complex and nucleotide-activated protein kinase complex. Colocalizes with axoneme. Implicated in congestive heart failure.

NR:

description
cAMP-dependent protein kinase type II-alpha regulatory subunit-like

GO:

id name namespace
GO:0001932 regulation of protein phosphorylation biological_process
GO:0005952 cAMP-dependent protein kinase complex cellular_component
GO:0008603 cAMP-dependent protein kinase regulator activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223686.1 True 1721 mRNA 0.50 10 484527 495149

Neighbor

gene id symbol gene type direction distance location
slc25a20 slc25a20 coding upstream 488 477387 ~ 484039 (+)
LOC122327927 nckipsd coding upstream 7328 472214 ~ 477199 (+)
zgc:112334 zgc:112334,LOC107681331,LOC107573142 coding upstream 14172 459922 ~ 470355 (+)
LOC122327999 zgc:153713,LOC107705003,LOC108254710,LOC107737929,LOC107681330,LOC105904931,LOC106583462 coding upstream 30729 450828 ~ 453798 (+)
LOC122327972 ora1,LOC107571576,LOC107704997,LOC107719054 coding upstream 33706 449199 ~ 450821 (+)
sdhb sdhb,LOC107656920,LOC107573137,LOC105927147 coding downstream 60734 555883 ~ 558871 (+)
LOC122327960 ora4,LOC107722985,LOC107656911,LOC107573771,LOC103385863 coding downstream 107294 602443 ~ 605509 (+)
LOC122327913 NA coding downstream 128603 623752 ~ 630500 (+)
capzb capzb,LOC105897928,LOC106565651,LOC106583096 coding downstream 172404 667553 ~ 679141 (+)
celsr2 celsr2,LOC107690562,LOC107723072,LOC107750703,LOC107656894 coding downstream 187013 682162 ~ 718384 (+)
G147905 NA non-coding upstream 12982 471068 ~ 471545 (+)
G147897 NA non-coding upstream 25009 457710 ~ 459518 (+)
LOC122328039 NA non-coding upstream 41845 439437 ~ 442682 (+)
G147884 NA non-coding upstream 108203 375391 ~ 376324 (+)
G147883 LOC107685875,LOC107741456,LOC107667978,LOC107575420,LOC107561645,LOC107670352,LOC107575457,LOC107727338,LOC107566978 non-coding upstream 112687 371146 ~ 371840 (+)
G147891 spen,LOC107571566,LOC107719036 non-coding downstream 2576 497725 ~ 729074 (+)
G147939 NA non-coding downstream 27310 522459 ~ 522722 (+)
G147942 slc25a34 non-coding downstream 35418 530567 ~ 531534 (+)
G147923 NA non-coding downstream 57797 552946 ~ 553698 (+)
G147938 NA non-coding downstream 64596 559745 ~ 577381 (+)
G147868 zgc:66156,wu:fd14a01,LOC103138443,LOC103360557,LOC103360549,LOC107705004,LOC107681327,LOC107575389,LOC107571573,LOC108261437,LOC108261476 other upstream 47182 345925 ~ 437345 (+)
mfap2 mfap2 other downstream 63855 559004 ~ 564221 (+)
G147956 NA other downstream 127334 622483 ~ 623367 (+)
G147937 NA other downstream 158731 653880 ~ 659614 (+)
G147896 NA other downstream 231251 726400 ~ 726767 (+)
G147985 LOC107723118,LOC107656907,LOC107572366 other downstream 255130 750279 ~ 751509 (+)

Expression


Co-expression Network