G16400


Basic Information

Item Value
gene id G16400
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5078342 ~ 5078541 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU18352
AACACATTCAGCAGTTGTGTCCTGTGTGGCTCTGGAATAAGTCCACCAGGTAATTCCCTGAGGAAAAGTCTCAGTAATGAGGCGAGAGTAGGAATATCCTCACTGTCAAACTCCGGAACGCCTCCTTGATCAAAACTTTTCCTCAATTCCTGGCAGCGTTTCACTTTCCCGCCAACCCTGAACAGGCCACTCTCTCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18352 True 200 lncRNA 0.44 1 5078342 5078541

Neighbor

gene id symbol gene type direction distance location
CI01000001_05062950_05065565 NA coding downstream 12777 5062297 ~ 5065565 (-)
CI01000001_05017930_05027838 NA coding downstream 50504 5017520 ~ 5027838 (-)
CI01000001_05003724_05017009 PM20D1.2, PM20D1 coding downstream 61333 5003655 ~ 5017009 (-)
CI01000001_05001068_05003302 NA coding downstream 74925 5000541 ~ 5003417 (-)
CI01000001_04944573_04950116 TFIP11 coding downstream 128226 4944485 ~ 4950116 (-)
CI01000001_05155976_05158742 NA coding upstream 77380 5155921 ~ 5158742 (-)
CI01000001_05191382_05196348 HSD17B10 coding upstream 112518 5191059 ~ 5196348 (-)
CI01000001_05205733_05220435 FAM120C coding upstream 126035 5204576 ~ 5221615 (-)
CI01000001_05288832_05293421 SEPHS2, SPS2 coding upstream 208215 5286756 ~ 5293421 (-)
CI01000001_05295894_05308912 SSR4, SSRD, IKBKG coding upstream 216982 5295523 ~ 5308986 (-)
G16390 NA non-coding downstream 19415 5058690 ~ 5058927 (-)
G16388 NA non-coding downstream 24252 5051494 ~ 5054090 (-)
G16381 NA non-coding downstream 89004 4988569 ~ 4989338 (-)
G16384 NA non-coding downstream 96024 4981978 ~ 4982318 (-)
G16383 NA non-coding downstream 98276 4979727 ~ 4980066 (-)
G16459 NA non-coding upstream 110740 5189281 ~ 5189642 (-)
G16461 NA non-coding upstream 153845 5232386 ~ 5251506 (-)
G16497 NA non-coding upstream 272127 5350668 ~ 5350915 (-)
G16509 NA non-coding upstream 335709 5414250 ~ 5414495 (-)
G16512 NA non-coding upstream 340400 5418941 ~ 5419396 (-)
G16332 NA other downstream 120500 4950689 ~ 4957842 (-)
G15736 NA other downstream 276947 4800901 ~ 4801395 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other downstream 350135 4725927 ~ 4728210 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other downstream 600197 4468209 ~ 4523431 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 678827 4392314 ~ 4399804 (-)
G16462 NA other upstream 144236 5222777 ~ 5229585 (-)
G16664 NA other upstream 1265563 6344104 ~ 6347955 (-)
G16753 NA other upstream 1505939 6583054 ~ 6615589 (-)
G17789 NA other upstream 1758984 6837525 ~ 6890414 (-)
CI01000001_06932075_06937182 NA other upstream 1857536 6931621 ~ 6937231 (-)

Expression


Co-expression Network