XLOC_000682 (inpp4b)


Basic Information

Item Value
gene id XLOC_000682
gene name inpp4b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 52929185 ~ 53225121 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001152
CAGACTTAAGTTAACGGCACTACGGCAGGATTGACTGACTGAGCGCCTCAGTGGACTTTCTCTTTCAGTGTGCTAGTTATAAAGCACGAAATTAACAAAAGAAGATGGAAAAGAGAACACGAGATCCTGTTTTTCCCTCTGGAGTGAGCTTCCCACTTGATTGCCCAGTTTATAACGACACGTTCATCAAAGTCAGTGTCTATGGAGTGAGTGACGAACAGCAGTCGagCAACTTCCTTGGAACCAGCCGCTTCTCCGTGGCCGATCTCCTCCATTCCAAAGACCAGCAGCTTTCTCTCAGCCTGAGGACAGCAGATGATTCTGTCACAGTGGGCACAGTTCTGGTGAGCCGGATGAAGATGGGGGAGATTGAGGATGGAGAGTGCACGCTGGTGTACGAGTCGTCACATGGCATTAATGATAAAGAGAACGGACCAATAATGAACACTGTGTTTCAGAATGCAGTGTGCAAGGTCTACCGGTTTCAGACGGTGGACAGTAAATGGATGCTGGTGCGGGAACAGATGGCGGAGTGTACACTGTCCTTCAGCATCCCGAAGCAGCTCATTGGCCTCTGCATTCAGGAGGACACCTGCAGGATACAGGAGCTGAAGGATCTGGGAGAGCTTTCACCACACTGGCACAACCTGCGGAAAGACGTGATCTCTCGCTACGAACAGATCATCAAGGAGTACCAGGACACGCTGGTGGAGCTGGAGAAACTCACAGGCCCGTCGTTCAAGCCCAGCTGCAGCAAAGGCCAGAAGTATCTGGAGTTCATTCCCATCAACCTGCACACGCAGAGGATGAGGGTCACGTGTCCCAGGAAAACAGATTCCTGCTATGATGTGGTCACAGTAGGAGCTCCGGCAGCCCATTCGCAAGGCTTCAAGAACGGGGGATTGCAGAAACTGCTCAGCAAATATGAGTCTGAGAAGAAGAGctACAGCACAGCATATCAGTGCATCTACTATCCTCCAGAGCAGACGACCAAAGCCAGAGAGATCCTGAGTGTGGTTTCTCAGCTGCAGCCGCACATCACTGCATTGGCCGATCAGCTGCTGCAGAGCCCCAGAGACGCTCTCAGAGACACACTTAAGAGCCTGGAGGACAAGaCGGAGCAGTTTGTTCATGCTCTGAAGGATGAGCTGGTGAAGAGCGCCCTCCTAGCGCTACATGCTGCCCGTCCCGGATATGTCAGCAAAAGTCAGACTTCTGCACCGTCCAGCCCACCGGAGCCGAATGAGGAGCCTAATGTGGTCTGCAATAATGTGAACAGCTCTCAAACACCGCTGAAAGAGAGCAAAGCGTCTCCTGTCCGCTCAGACTCCATCCCGCACCATAAAGAGTACGATGAGGAGGAATGGGACAGGGTCTGGGCCAGTGTGGCGAAGAGCTTGAACTCTGTCATTGCCATGGTGGAGAAACTACAGGAGCAGGACAACAACAACCAGGAGTCAACACCCTGTCAAACACTCGCAGACGTCATCACCTCACACAGTCCCGATCGCCCCATGGATGTGGTGGACTGGCGGGATCAGCTTGGGGTCCTGGTGCAATCGCTGAAGGAGTGTGTGCTGGATGTGGCAGAGAGAGCCAGACACTCCGTCATCTTTGTGCTGCTCCAGGAGGCGGCGTGCAGCACGGCACAGGGTCTGCAGCTCCAGCAGAGACGAGACACCGTTTTCAGCCAAGCTctgACGGCGCTGGCGTGTGGATTCGTCATGCGGTTGTACGCTGGTTTAGAGGATAAAGGTTTTCTCAGACAGCTGCATGCAGTCGGCCTGGTGGCTCAGTTTGAGAGTCTCCTCAGCACGTACAgtgAAGAGATTGGCATGCTGGAGGACATGGAGGTGGGCATCTCAGATCTGACCAGAGTGACGTTCAGGATCACAGAGGCGCTTTCTGAGGATTCAGCCAGTCTGACGCCCATCATCAGCGGTAGacgAGACCGTTACACTGTGGAGGTGCCTCTGCCACATGATGCCTTCCAGACGCTGCCGGATGAGCTGCGCCAGGGCAAGCTGCTACACGTCATCCCTGTGCTCTTCAATGTGGGCATCAACGAACAACAGACCATCGCTGAGAGGTTTGGTGACATTTCTTTACAGGAGAGAATAAACCAGAAAAACTTTGAGATTCTAGAAGGTTACTATAAATCGCTGAGCAACACGCTGCCGTCGGAATGTCTGCCGAGTTTTCAGACGCAGACGGACATTAAGGAGCTGCTGGAAACGCTCGGACAGAATGTAGTGACCAAGAAGAGGAAGAACGTGGAGATATTGTGGCTTGCAGGAACGATCTGTCGACGGATGAATGGTATCCGCTTCACCAGCTGTAAAAGTGCCAAAGACCGGACGTCAATGTCGGTGACGCTGGAGCAGTGCTGTCTGCTGCGGGACGAGCATCAGCTCAATAAAGACTACTTTGTGCGCGCTTTGGACTGCATGAGGAGAGAAGGCTGCCGGATTGAGAATGTGCAAAAGAATATAAAGTGCAGGAAATACGCCTTCAACATGCTGCAGCTGATGGCTTTTCCCAAATACTACCGGCCGCCTGATGGGACATACGGGAAGGTGGACTCATGAGAAACAGCACCGTTCCTCTTATTATTGACACATCTACAGTGGGGTTCAGAAGCTATGCTGACAATTTGGAaattatatttgagaaaatgtattATATGACACAAAATTATCCTTCAGGTGCTGCTCAGTCAATCTGACTCTTATTTGTTTGTTAGGTTtggtttattcatttaaatggtaCGAATATTTTgccactataaatatatatatatatatatatatatatatatatg
>TCONS_00001153
ttaagacAAAGAACACGAGATCCTGTTTTTCCCTCTGGAGTGAGCTTCCCACTTGATTGCCCAGTTTATAACGACACGTTCATCAAAGTCAGTGTCTATGGAGTGAGTGACGAACAGCAGTCGagCAACTTCCTTGGAACCAGCCGCTTCTCCGTGGCCGATCTCCTCCATTCCAAAGACCAGCAGCTTTCTCTCAGCCTGAGGACAGCAGATGATTCTGTCACAGTGGGCACAGTTCTGGTGAGCCGGATGAAGATGGGGGAGATTGAGGATGGAGAGGTGGATCACATTACAGCCGACATGCACCAGAAGGTGAGATGTGTTGAAGAGTCGTCACATGGCATTAATGATAAAGAGAACGGACCAATAATGAACACTGTGTTTCAGAATGCAGTGTGCAAGGTCTACCGGTTTCAGACGGTGGACAGTAAATGGATGCTGGTGCGGGAACAGATGGCGGAGTGTACACTGTCCTTCAGCATCCCGAAGCAGCTCATTGGCCTCTGCATTCAGGAGGACACCTGCAGGATACAGGAGCTGAAGGATCTGGGAGAGCTTTCACCACACTGGCACAACCTGCGGAAAGACGTGATCTCTCGCTACGAACAGATCATCAAGGAGTACCAGGACACGCTGGTGGAGCTGGAGAAACTCACAGGCCCGTCGTTCAAGCCCAGCTGCAGCAAAGGCCAGAAGTATCTGGAGTTCATTCCCATCAACCTGCACACGCAGAGGATGAGGGTCACGTGTCCCAGGAAAACAGATTCCTGCTATGATGTGGTCACAGTAGGAGCTCCGGCAGCCCATTCGCAAGGCTTCAAGAACGGGGGATTGCAGAAACTGCTCAGCAAATATGAGTCTGAGAAGAAGAGctACAGCACAGCATATCAGTGCATCTACTATCCTCCAGAGCAGACGACCAAAGCCAGAGAGATCCTGAGTGTGGTTTCTCAGCTGCAGCCGCACATCACTGCATTGGCCGATCAGCTGCTGCAGAGCCCCAGAGACGCTCTCAGAGACACACTTAAGAGCCTGGAGGACAAGaCGGAGCAGTTTGTTCATGCTCTGAAGGATGAGCTGGTGAAGAGCGCCCTCCTAGCGCTACATGCTGCCCGTCCCGGATATGTCAGCAAAAGTCAGACTTCTGCACCGTCCAGCCCACCGGAGCCGAATGAGGAGCCTAATGTGGTCTGCAATAATGTGAACAGCTCTCAAACACCGCTGAAAGAGAGCAAAGCGTCTCCTGTCCGCTCAGACTCCATCCCGCACCATAAAGAGTACGATGAGGAGGAATGGGACAGGGTCTGGGCCAGTGTGGCGAAGAGCTTGAACTCTGTCATTGCCATGGTGGAGAAACTACAGGAGCAGGACAACAACAACCAGGAGTCAACACCCTGTCAAACACTCGCAGACGTCATCACCTCACACAATCGCCCCATGGATGTGGTGGACTGGCGGGATCAGCTTGGGGTCCTGGTGCAATCGCTGAAGGAGTGTGTGCTGGATGTGGCAGAGAGAGCCAGACACTCCGTCATCTTTGTGCTGCTCCAGGAGGCGGCGTGCAGCACGGCACAGGGTCTGCAGCTCCAGCAGAGACGAGACACCGTTTTCAGCCAAGCTctgACGGCGCTGGCGTGTGGATTCGTCATGCGGTTGTACGCTGGTTTAGAGGATAAAGGTTTTCTCAGACAGCTGCATGCAGTCGGCCTGGTGGCTCAGTTTGAGAGTCTCCTCAGCACGTACAgtgAAGAGATTGGCATGCTGGAGGACATGGAGGTGGGCATCTCAGATCTGACCAGAGTGACGTTCAGGATCACAGAGGCGCTTTCTGAGGATTCAGCCAGTCTGACGCCCATCATCAGCGGTAGacgAGACCGTTACACTGTGGAGGTGCCTCTGCCACATGATGCCTTCCAGACGCTGCCGGATGAGCTGCGCCAGGGCAAGCTGCTACACGTCATCCCTGTGCTCTTCAATGTGGGCATCAACGAACAACAGACCATCGCTGAGAGGTTTGGTGACATTTCTTTACAGGAGAGAATAAACCAGAAAAACTTTGAGATTCTAGAAGGTTACTATAAATCGCTGAGCAACACGCTGCCGTCGGAATGTCTGCCGAGTTTTCAGACGCAGACGGACATTAAGGAGCTGCTGGAAACGCTCGGACAGAATGTAGTGACCAAGAAGAGGAAGAACGTGGAGATATTGTGGCTTGCAGGAACGATCTGTCGACGGATGAATGGTATCCGCTTCACCAGCTGTAAAAGTGCCAAAGACCGGACGTCAATGTCGGTGACGCTGGAGCAGTGCTGTCTGCTGCGGGACGAGCATCAGCTCAATAAAGACTACTTTGTGCGCGCTTTGGACTGCATGAGGAGAGAAGGCTGCCGGATTGAGAATGTGCAAAAGAATATAAAGTGCAGGAAATACGCCTTCAACATGCTGCAGCTGATGGCTTTTCCCAAATACTACCGGCCGCCTGATGGGACATACGGGAAGGTGGACTCATGA
>TCONS_00001154
GTAACTCTGATCAAGGACACATCTGCTGTGTAACGCTTTTATTCAACGGCTGTTTATGGATGTTAACAAGCATTACTGGGCTTCAGGTTCAAGCTGagCAACTTCCTTGGAACCAGCCGCTTCTCCGTGGCCGATCTCCTCCATTCCAAAGACCAGCAGCTTTCTCTCAGCCTGAGGACAGCAGATGATTCTGTCACAGTGGGCACAGTTCTGGTGAGCCGGATGAAGATGGGGGAGATTGAGGATGGAGAGGTG
>TCONS_00001155
CAGCTCAGATCTGCAGTGGTTTATTGAGTCGGGCTGAGTCTTTGCTCTGCGTGCTCCTCATATGcacgcgcgtgcgtgcgtgcgtgtgtgtgtgtgtatgtgtgtgttcgcTGTTATGCATAGATGGGAAGGAGGCTGCAAACAGACCGGTCTGCAGATAATTGTTAGGACATGCGTTTTCACACAGGAGCCCATTAAAGCGGTTCTACCCCGCGACAGGACTCTTCCTCTGTGGACCTGCGAGTGCTTCTCGTAACAAagCAACTTCCTTGGAACCAGCCGCTTCTCCGTGGCCGATCTCCTCCATTCCAAAGACCAGCAGCTTTCTCTCAGCCTGAGGACAGCAGATGATTCTGTCACAGTGGGCACAGTTCTGGTGAGCCGGATGAAGATGGGGGAGATTGAGGATGGAGAGGTGGATCACATTACAGCCGACATGCACCAGAAGTGCACGCTGGTGTACGAGTCGTCACATGGCATTAATGATAAAGAGAACGGACCAATAATGAACACTGTGTTTCAGAATGCAGTGTGCAAGGTCTACCGGTTTCAGACGGTGGACAGTAAATGGATGCTGGTGCGGGAACAGATGGCGGAGTGTACACTGTCCTTCAGCATCCCGAAGCAGCTCATTGGCCTCTGCATTCAGGAGGACACCTGCAGGTAAGACTTCAGAGCGAGCAGAGGACGCTGGGAAAGAGTAAAGAAGGAGAGAAAAGTATTGTGGCGGCACCAAAACTGCTGCATACACTCAAAAACAAATTATGTTTGCTTTtagttcaaactactcatttaaaatgagctgaa
>TCONS_00001156
TCTGCAGTGGTTTATTGAGTCGGGCTGAGTCTTTGCTCTGCGTGCTCCTCATATGcacgcgcgtgcgtgcgtgcgtgtgtgtgtgtgtatgtgtgtgttcgcTGTTATGCATAGATGGGAAGGAGGCTGCAAACAGACCGGTCTGCAGATAATTGTTAGGACATGCGTTTTCACACAGGAGCCCATTAAAGCGGTTCTACCCCGCGACAGGACTCTTCCTCTGTGGACCTGCGAGTGCTTCTCGTAACAAagCAACTTCCTTGGAACCAGCCGCTTCTCCGTGGCCGATCTCCTCCATTCCAAAGACCAGCAGCTTTCTCTCAGCCTGAGGTGAGTTGCGATGTGGGATGCTATTTATCATGCTGCGCTGCCGTTTTCTGCTGTAAACTTCATTTGGTGTGTTTGGTGCACGAGTGAGGATCTCTGGAGGGAGATGATGTCAGGTGCACACAGCTGATCAAACACGACTGAGGCTCCAGCAGCAAACAGGCCATCTGCTGCTGGATTTGCCACATATTTAGTTGCCACACAACTTGATTCGGCTGTCCAATGAATGAGTTTCTTGTTCTACGTCAGGGCTGGGTTGCATGGGGCTTTATAGCAtagtagatttataatatttgcaCATCAAGGAGAGTGGAATGATGGGTAAATAAAGAGCAGGTTGCATCCCAAACAGGTCAGAACATGGAGTTTagtagcttcttttttttttttttagaattattttttcggggttttcacctttatttttgacaggacagtagagaattgacaggaaaacatggggagcagagagtggggaaggattggcataggaccgcgaggcggaatcgaaTCCGGGT

Function

symbol description
inpp4b Predicted to enable phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity. Predicted to be active in cytoplasm. Orthologous to human INPP4B (inositol polyphosphate-4-phosphatase type II B).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0016316 phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090312-97 Predicted to enable phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity. Predicted to be active in cytoplasm. Orthologous to human INPP4B (inositol polyphosphate-4-phosphatase type II B).

Ensembl:

ensembl_id ENSDARG00000075201

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001152 False 2821 mRNA 0.51 20 52929185 53225121
TCONS_00001153 False 2511 mRNA 0.53 20 52953423 53224888
TCONS_00001154 False 255 processed_transcript 0.51 3 52999832 53061197
TCONS_00001155 False 807 lncRNA 0.50 5 53007769 53081933
TCONS_00001156 True 845 lncRNA 0.48 2 53007778 53026231

Neighbor

gene id symbol gene type direction distance location
XLOC_000680 smarca5 coding upstream 108231 52792439 ~ 52820954 (+)
XLOC_000681 NA coding upstream 121342 52807632 ~ 52807843 (+)
XLOC_000679 wu:fc75a09 coding upstream 165738 52754085 ~ 52763447 (+)
XLOC_000678 CABZ01021532.1 coding upstream 193060 52735484 ~ 52736125 (+)
XLOC_000677 osbp coding upstream 230122 52662203 ~ 52699063 (+)
XLOC_000684 NA coding downstream 41279 53266400 ~ 53278288 (+)
XLOC_000685 rnf150a coding downstream 54740 53279861 ~ 53299024 (+)
XLOC_000686 NA coding downstream 95038 53320159 ~ 53320674 (+)
XLOC_000687 NA coding downstream 95810 53320931 ~ 53321338 (+)
XLOC_000688 tbc1d9 coding downstream 96757 53321878 ~ 53361108 (+)
XLOC_000673 BX323839.1 non-coding upstream 418429 52495043 ~ 52510756 (+)
XLOC_000667 NA non-coding upstream 560987 52363402 ~ 52368198 (+)
XLOC_000668 NA non-coding upstream 561608 52365030 ~ 52367577 (+)
XLOC_000666 LO017718.1 non-coding upstream 566078 52353162 ~ 52363107 (+)
XLOC_000689 AL935166.1 non-coding downstream 139389 53364510 ~ 53368034 (+)
XLOC_000691 NA non-coding downstream 264978 53490099 ~ 53491305 (+)

Expression


Co-expression Network