G15950


Basic Information

Item Value
gene id G15950
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5424040 ~ 5424339 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17820
AGCAGATTTAAGTTTTAGCGCCATGTCGCGTTTTTATTGGCTGGTCAGTAGACGTAGGTCGTAGCAGCAAACACACTGTGCGTTGATCATGCTAAATTTATGACACTGTCAGAAAATGATCGCAGGCTATCTTTGGTCACAAGACCGAGAAAACGGCTGTCTTTGAACCTCTCTCATTGTACGACATAGGACCACCGATTAAGAGCCACGATCACAGAAATCGCCACGATCATTTCACAATGGCAATCTTTCGTCTGGGACAACCAAAAATCGTGCAGTGTATCCCGGCCTTAAGGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17820 True 300 lncRNA 0.46 1 5424040 5424339

Neighbor

gene id symbol gene type direction distance location
CI01000001_05401665_05402500 EMP3B, EMP3 coding upstream 21269 5401665 ~ 5402771 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding upstream 39802 5365162 ~ 5384238 (+)
CI01000001_05279884_05287123 NA coding upstream 136661 5279837 ~ 5287698 (+)
CI01000001_05270301_05279405 AVPR2AB coding upstream 143233 5270301 ~ 5280807 (+)
CI01000001_05223340_05229184 IDH3G coding upstream 194381 5223340 ~ 5229659 (+)
CI01000001_05427300_05427801 NA coding downstream 2893 5427232 ~ 5427818 (+)
CI01000001_05478200_05480124 NA coding downstream 53861 5478200 ~ 5480504 (+)
CI01000001_05487409_05494726 NA coding downstream 62963 5487302 ~ 5495336 (+)
CI01000001_05498507_05500723 NA coding downstream 73871 5498210 ~ 5501377 (+)
CI01000001_05565644_05568075 NA coding downstream 141305 5565644 ~ 5568488 (+)
G15949 NA non-coding upstream 265 5423569 ~ 5423775 (+)
G15948 NA non-coding upstream 1512 5422303 ~ 5422528 (+)
G15915 NA non-coding upstream 12350 5411483 ~ 5411690 (+)
G15911 NA non-coding upstream 66138 5357630 ~ 5357902 (+)
G15854 NA non-coding upstream 82148 5337120 ~ 5341892 (+)
G15957 NA non-coding downstream 22962 5447301 ~ 5447941 (+)
G15959 NA non-coding downstream 24821 5449160 ~ 5449393 (+)
G15960 NA non-coding downstream 25070 5449409 ~ 5449651 (+)
G15962 NA non-coding downstream 38047 5462386 ~ 5462593 (+)
G15964 NA non-coding downstream 45701 5470040 ~ 5470249 (+)
G15794 NA other upstream 359336 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1802589 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3753036 1667762 ~ 1671167 (+)
G13051 NA other upstream 4378888 1043713 ~ 1045152 (+)
G15995 NA other downstream 287546 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2108233 7531541 ~ 7540586 (+)
G17234 NA other downstream 2607785 8032124 ~ 8032483 (+)
G17353 NA other downstream 3791683 9216022 ~ 9228859 (+)
G17354 NA other downstream 3810124 9234463 ~ 9240677 (+)

Expression


Co-expression Network