CI01000001_05223340_05229184 (IDH3G)


Basic Information

Item Value
gene id CI01000001_05223340_05229184
gene name IDH3G
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5223340 ~ 5229659 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05223340_05229184.mRNA
CTAAAAAGCCCTGCAGTGTGCTGCCAGAGGGAGAAGTCCTCATATACTACTACACCGGCAATCTTATGCTTTTAACATTCAACAATATTCCCAGATTCTGCTGTGTGCCTGTGGACTTTGAGGTTGTCAGGGTGGATTCGGCTGCTTCCTCTGAGGATGACATCAATAACGCTGTTACTGCAATCAAACGTAATGGAGTAGCACTTAAGGGTAACTTGGAGACTAATCACAACCTTCCTCCATCTCATAAATCCAGGAACAATTTGCTTCGTACATCTTTGGACCTGTATGCTAACGTGATGCACTGTCAGTCTCTTCCTGGAGTCCCAAGCCGCCACAAAGACATTGATGTTATCATCATTAGGGAGAACACTGAAGGAGAATACAGCAGCTTGGAGCATGAGAATGTTCCTGGGGTGGTGGAGTGTCTGAAGATCATAACACGTGTGAATTCATTGCGGATCGCTGAGTATGCCTTTAACTTGGCCAGGGAGAAAGGCCGCCGCAAGTGCTGTAAAGAGGTGGCAGCTGGGTATCCTGATATCACATTTGATGACATGATTGTGGATAATACCACCATGCAGATGGTCTCTAAGCCCCAGCAGTTTGATGTGATGGTGATGCCGAATCTCTATGGAAACGTGGTGAGCAATGTGTGTGCTGGACTTGTTGGAGGTCCAGGTCTGGTACCAGGAGTCAACTACGGCAAGGACTATGCTGTTTTTGAGACCGCCACTAGAAACACTGGAAAAAGCATTGCTAACAAGAATATTGCAAACCCCACGGCCACACTGCTGGCCAGCTGTGTGATGCTGGATCACTTAAAGCTTCATGCATATGCCAGGATGATACGAAAGGCAGTTCTGAAAACTTTGTCTGAAACTCGGTTTCAGACAGCTGATTTGGGAGGTCGGTGCACTACATCTGAAGTGGTCCACTCCATTATGCAGGAGATCCAGAGAGGAGGACCACGCACATCAGAGCAGATCTGAACTTCATTTCAGCAGCTTCTAGAGACCACAGAAACAATCCAAATACATGCCTAATTCTTCTGTGAGAAACAGGACGCATGGTGAACTCTTCAATGATAAGATACTGAGACTGTAAAGATGTAGGTTGAAGTGTGTGTTGAAATTCATCCTTGATTCTTTTGTAATATTTGAATCTGTATATTTAACAGTATAAATGTTGCGGATGTTGTTTATCTGTTATGATCAGGTTAGGTTAAAGCCTTTATCTGAACTGGCATGGACTGAATTCTGTAATTTTTTCATGGATATGTATTGCCTGTTGTTAACTGATGATGCACCAAGCACTTTCATTAATACATTTCTAACTATTACCTCATCAAACTTTTGTTCATGCCTCCAAAGACTTCATTTCATGAAGTTCAGTGAAGTAAAAATGATATTACTTGGTTTGAACTTTTTCCAATAGGTGGCACTAAAACGCTGCACTTCAGCTTCA

Function

symbol description
idh3g Predicted to enable NAD binding activity; isocitrate dehydrogenase (NAD+) activity; and magnesium ion binding activity. Predicted to be involved in isocitrate metabolic process and tricarboxylic acid cycle. Predicted to be active in mitochondrion. Orthologous to human IDH3G (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma).

NR:

description
mitochondrial isocitrate dehydrogenase subunit gamma 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05223340_05229184.mRNA True 1467 mRNA 0.43 10 5223340 5229659

Neighbor

gene id symbol gene type direction distance location
CI01000001_05075984_05079729 NA coding upstream 143609 5075934 ~ 5079731 (+)
CI01000001_05071017_05075175 NA coding upstream 147587 5069303 ~ 5075753 (+)
CI01000001_05051664_05059659 MFSD4B coding upstream 163400 5051529 ~ 5059940 (+)
CI01000001_04993860_04998535 NA coding upstream 224579 4993860 ~ 4998761 (+)
CI01000001_04976994_04988795 NFASCB coding upstream 234258 4976347 ~ 4989082 (+)
CI01000001_05270301_05279405 AVPR2AB coding downstream 40642 5270301 ~ 5280807 (+)
CI01000001_05279884_05287123 NA coding downstream 50178 5279837 ~ 5287698 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding downstream 135503 5365162 ~ 5384238 (+)
CI01000001_05401665_05402500 EMP3B, EMP3 coding downstream 172006 5401665 ~ 5402771 (+)
CI01000001_05427300_05427801 NA coding downstream 197573 5427232 ~ 5427818 (+)
G15846 NA non-coding upstream 9088 5212269 ~ 5214252 (+)
G15879 NA non-coding upstream 25585 5197546 ~ 5197755 (+)
G15878 NA non-coding upstream 26099 5197025 ~ 5197241 (+)
G15877 NA non-coding upstream 26412 5196661 ~ 5196928 (+)
G15875 NA non-coding upstream 39980 5183072 ~ 5183360 (+)
G15895 NA non-coding downstream 53801 5283460 ~ 5283723 (+)
G15839 NA non-coding downstream 87827 5317486 ~ 5317993 (+)
G15854 NA non-coding downstream 107461 5337120 ~ 5341892 (+)
G15911 NA non-coding downstream 127971 5357630 ~ 5357902 (+)
G15915 NA non-coding downstream 181824 5411483 ~ 5411690 (+)
G15794 NA other upstream 158636 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1601889 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3552336 1667762 ~ 1671167 (+)
G13051 NA other upstream 4178188 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4731283 483853 ~ 488825 (+)
G15995 NA other downstream 482226 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2302913 7531541 ~ 7540586 (+)
G17234 NA other downstream 2802465 8032124 ~ 8032483 (+)
G17353 NA other downstream 3986363 9216022 ~ 9228859 (+)

Expression


Co-expression Network