G15854


Basic Information

Item Value
gene id G15854
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5337120 ~ 5341892 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17718
TGCAGATAGTACTTATTCATAGAGGCATTAGCTGCTGCCAAGTTGAGCAAGTAGTCGTTACGAGCTTTAGTGCATTTCAGCTGGGTTTCCTGTACTTTCCCTTGTCTCTTCTCCATCAGTCTCTCCATTTTTTTCACAGAGCTGCGCCTCTGCCCCCCTGATTGGCTGAGCCCAAAATCAGCTGACTTGCCCGTCTGTTTCTCCTCCAGTCGGGTGGCCTCTTTGAGCTTTCCTTCAGCAGCCAGACAGTCGATGTGGTACTGATGATAAGTTTTCAAAGCCGTCTGCAGCTCTGTGGTGACTTTCAAAAGCTCATCCTGCATCTGGAGTCCCACCTCCTTGCTCCGCTTTGCCAGGCGGTGTGTGTCCTCTATGCAGTGTGAAAGCCGCTGCGTGAGTGTGTTGCCACAGAGCTCGCTCAGTGAACTGTGATCTTTACTCTCCTGCCTGGTCTGGGTCAGCAGAACAGACCAGCACTGCGCCACCGACAGGTCTAACTGCTCCTTCCTCTTGGTCTTCACTGTGAACTTCTCGCTGAGTTTCTCCAGAGAACGGGCATATTCTGCCTCAATCTCCCCCCGTCTGCGCAGGTACTCGCTTAGATCCTGCAGCTGCTGTGTCTTGACCTCCACCTGCGCGTCTAGGATTTTGAGCTGCTCCGATAGCTGACCACGCACCTCTTTGATTTGAGTCTCATACTCCGCCAGACTCCCCTTTTCCTTCCTCAGTTTTCCATGTGATGTCATGGTCTCCTTTGCTGGTGTAGCGCTCCTGTTGACTTGTTCACAGTAGCTCAAAGTCTGAGACGATCACGTACAGATTTTGTTCCTCTTCACAAAGAAATTCCTCTAATTCCGTATTGGTGTTTTTATTTTGCAAAATGATTTATATTTCCATGTTCGGTCTTGAGTTCATACTGAGCTACTAAAGAAAAATCTTTTCACTCTTTTCAGTCCTTCAATCTGTGCCTCAGCAGAAACGGAACAGGGAAGTCTCTGTGTGCATGTGTATGTTTGTGTGTGAGTGTGTGCGCTTGTGAACACGGAGGGAGTTCCAATCCAAGCGATTCTCTCTCAGCACTGAGCTTCTGCATTTAAAGATTCGTTTTCAGAGCAGAGAACGTTGCAGGGGCCTGATAGTTTTCTAGTTGTTTCCTGAAACTCCTGAGTGGTTAAATGTGATTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17718 True 1187 lncRNA 0.49 6 5337120 5341892

Neighbor

gene id symbol gene type direction distance location
CI01000001_05279884_05287123 NA coding upstream 49741 5279837 ~ 5287698 (+)
CI01000001_05270301_05279405 AVPR2AB coding upstream 56313 5270301 ~ 5280807 (+)
CI01000001_05223340_05229184 IDH3G coding upstream 107461 5223340 ~ 5229659 (+)
CI01000001_05075984_05079729 NA coding upstream 257389 5075934 ~ 5079731 (+)
CI01000001_05071017_05075175 NA coding upstream 261367 5069303 ~ 5075753 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding downstream 23270 5365162 ~ 5384238 (+)
CI01000001_05401665_05402500 EMP3B, EMP3 coding downstream 59773 5401665 ~ 5402771 (+)
CI01000001_05427300_05427801 NA coding downstream 85340 5427232 ~ 5427818 (+)
CI01000001_05478200_05480124 NA coding downstream 136308 5478200 ~ 5480504 (+)
CI01000001_05487409_05494726 NA coding downstream 145410 5487302 ~ 5495336 (+)
G15839 NA non-coding upstream 19127 5317486 ~ 5317993 (+)
G15895 NA non-coding upstream 53397 5283460 ~ 5283723 (+)
G15846 NA non-coding upstream 122868 5212269 ~ 5214252 (+)
G15879 NA non-coding upstream 139365 5197546 ~ 5197755 (+)
G15878 NA non-coding upstream 139879 5197025 ~ 5197241 (+)
G15911 NA non-coding downstream 15738 5357630 ~ 5357902 (+)
G15915 NA non-coding downstream 69591 5411483 ~ 5411690 (+)
G15948 NA non-coding downstream 80411 5422303 ~ 5422528 (+)
G15949 NA non-coding downstream 81677 5423569 ~ 5423775 (+)
G15950 NA non-coding downstream 82148 5424040 ~ 5424339 (+)
G15794 NA other upstream 272416 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1715669 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3666116 1667762 ~ 1671167 (+)
G13051 NA other upstream 4291968 1043713 ~ 1045152 (+)
G15995 NA other downstream 369993 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2190680 7531541 ~ 7540586 (+)
G17234 NA other downstream 2690232 8032124 ~ 8032483 (+)
G17353 NA other downstream 3874130 9216022 ~ 9228859 (+)
G17354 NA other downstream 3892571 9234463 ~ 9240677 (+)

Expression


Co-expression Network