G15846


Basic Information

Item Value
gene id G15846
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5212269 ~ 5214252 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17709
ACGCAGCACATGAGCAGCAGGTGAGATGGTACACAGGTCGGGTTGAGTAGGGCAGGGCAGTCAGAGCGCATGCAGGCTAAAAAGGCTCGCGTACGGCGGCTACGGTCCTCTGAGGCTCTGCCCAGCCACAACCGCCTGAGGTTGGGACACGTCCACTCGCGGAAACACAGGGCTGGAACGAGCTCAGGGGTCAGGGCAGATTTAGCTTTACTGGCACACCACTCCTTTACAATCACCGGGGGCACGTCAACTGGACTACGCTTGCGCATGGCTAGTCTCTCAAGCCTCCGCTGGGTCTCAGCCAAGCTGAACAGCACCCCGTAGGCATACTGGCGGGCAGAACGGAAAAGTAGAGAAGCAGGAGGCAGGTCTGGGTTGCACTCATCCTCTATACACACTGGCATCTTCATTTCCCCCTTGGTCAAGATGTGGTAGATCTGTGGATACATGAGTCCTCTCCTGTGTCTGTGCTCCGCCACTCTCAGCACCTCGGCACTGACCTGTGGAAGGGGTGGAGTTGTGATGTCCATGTGAGTCCGTGTTGGCATGGACAGCAATGATGGAATGGACGGCCCACTTCCGTTACCATGGTGTCCGTCCCCAGAGCCACTGCCGCCCCGTCCACTGGGATCTTCCCATCTCGTGGACTTGTCAGCCAAATGATTAGTGCTGGTGTCATTTTGCTCCTCCCCATCTGAAGACGACGACGATGAGGGGGAGGGGCCTGTGGGAGCAGCAGTGTGATGATTGGGCTGTCGGTTGCCACCTTGAGAGGAATCATATGGAGCAGACCAATCAGTAAAGCCCATTTTCCCAACTAGTGAATCATTACAGTCCTGCAGAGGCTGAGTTGGGTTCTGGCATAAAAGGGCTGGACCAGTGGCAGGGCTGGGTCCGTAGAGCCCACCTGGATAAGGCACCTTAACCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17709 True 931 lncRNA 0.41 4 5212269 5214252

Neighbor

gene id symbol gene type direction distance location
CI01000001_05075984_05079729 NA coding upstream 132538 5075934 ~ 5079731 (+)
CI01000001_05071017_05075175 NA coding upstream 136516 5069303 ~ 5075753 (+)
CI01000001_05051664_05059659 MFSD4B coding upstream 152329 5051529 ~ 5059940 (+)
CI01000001_04993860_04998535 NA coding upstream 213508 4993860 ~ 4998761 (+)
CI01000001_04976994_04988795 NFASCB coding upstream 223187 4976347 ~ 4989082 (+)
CI01000001_05223340_05229184 IDH3G coding downstream 9088 5223340 ~ 5229659 (+)
CI01000001_05270301_05279405 AVPR2AB coding downstream 56049 5270301 ~ 5280807 (+)
CI01000001_05279884_05287123 NA coding downstream 65585 5279837 ~ 5287698 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding downstream 150910 5365162 ~ 5384238 (+)
CI01000001_05401665_05402500 EMP3B, EMP3 coding downstream 187413 5401665 ~ 5402771 (+)
G15879 NA non-coding upstream 14514 5197546 ~ 5197755 (+)
G15878 NA non-coding upstream 15028 5197025 ~ 5197241 (+)
G15877 NA non-coding upstream 15341 5196661 ~ 5196928 (+)
G15875 NA non-coding upstream 28909 5183072 ~ 5183360 (+)
G15895 NA non-coding downstream 69208 5283460 ~ 5283723 (+)
G15839 NA non-coding downstream 103234 5317486 ~ 5317993 (+)
G15854 NA non-coding downstream 122868 5337120 ~ 5341892 (+)
G15911 NA non-coding downstream 143378 5357630 ~ 5357902 (+)
G15915 NA non-coding downstream 197231 5411483 ~ 5411690 (+)
G15794 NA other upstream 147565 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1590818 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3541265 1667762 ~ 1671167 (+)
G13051 NA other upstream 4167117 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4720212 483853 ~ 488825 (+)
G15995 NA other downstream 497633 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2318320 7531541 ~ 7540586 (+)
G17234 NA other downstream 2817872 8032124 ~ 8032483 (+)
G17353 NA other downstream 4001770 9216022 ~ 9228859 (+)

Expression


Co-expression Network