G15877


Basic Information

Item Value
gene id G15877
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5196661 ~ 5196928 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17741
AAATATATTGCCACTTATTTGTGCTTATCCATGAAGCTTGGCAAAAAATAATGAATGCTGCTTATTAAATAATGATTTATAATAACGGTATGCGTTGTATATAATAATAATAATTGTATATTTCACAAAATAATATTTTATCTATGACTGCAGCCATGGTTATATATGCATTATGCACTGTATTAGTAAAGATAATGCAAGGTAATAGCAATGTATTGACTACAATAGCCTCTTGAATTAATTAAAAAAATATTAATATGTATCCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17741 True 268 lncRNA 0.26 1 5196661 5196928

Neighbor

gene id symbol gene type direction distance location
CI01000001_05075984_05079729 NA coding upstream 116930 5075934 ~ 5079731 (+)
CI01000001_05071017_05075175 NA coding upstream 120908 5069303 ~ 5075753 (+)
CI01000001_05051664_05059659 MFSD4B coding upstream 136721 5051529 ~ 5059940 (+)
CI01000001_04993860_04998535 NA coding upstream 197900 4993860 ~ 4998761 (+)
CI01000001_04976994_04988795 NFASCB coding upstream 207579 4976347 ~ 4989082 (+)
CI01000001_05223340_05229184 IDH3G coding downstream 26412 5223340 ~ 5229659 (+)
CI01000001_05270301_05279405 AVPR2AB coding downstream 73373 5270301 ~ 5280807 (+)
CI01000001_05279884_05287123 NA coding downstream 82909 5279837 ~ 5287698 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding downstream 168234 5365162 ~ 5384238 (+)
CI01000001_05401665_05402500 EMP3B, EMP3 coding downstream 204737 5401665 ~ 5402771 (+)
G15875 NA non-coding upstream 13301 5183072 ~ 5183360 (+)
G15796 NA non-coding upstream 120175 5074401 ~ 5074805 (+)
G15817 NA non-coding upstream 135479 5060807 ~ 5061182 (+)
G15812 NA non-coding upstream 155096 5041366 ~ 5041565 (+)
G15878 NA non-coding downstream 97 5197025 ~ 5197241 (+)
G15879 NA non-coding downstream 618 5197546 ~ 5197755 (+)
G15846 NA non-coding downstream 15341 5212269 ~ 5214252 (+)
G15895 NA non-coding downstream 86532 5283460 ~ 5283723 (+)
G15839 NA non-coding downstream 120558 5317486 ~ 5317993 (+)
G15794 NA other upstream 131957 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1575210 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3525657 1667762 ~ 1671167 (+)
G13051 NA other upstream 4151509 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4704604 483853 ~ 488825 (+)
G15995 NA other downstream 514957 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2335644 7531541 ~ 7540586 (+)
G17234 NA other downstream 2835196 8032124 ~ 8032483 (+)
G17353 NA other downstream 4019094 9216022 ~ 9228859 (+)

Expression


Co-expression Network