G15895


Basic Information

Item Value
gene id G15895
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5283460 ~ 5283723 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17759
GCTTTTCTTAATTTTAATTTTTGTGATGGCAAAGCTGAATTTTCAGATCCTTTAGAAATCATTCAAATATGCTGATTTGGTGCATAATGATTTCTTATTATTATGCTGAAAACAGCTGTGATGCTTAATATTTTTGTATTTTTTTTTTTAATATTTTAATATTTTTTCAGGATGTTTTGATGAATACAAGCAAAAGAGAACAGCATTTATTTAAAACGTGACCCAGGTCGGTGCCGATAGCCTAGTGGTTAGCGTACCAGCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17759 True 264 lncRNA 0.52 1 5283460 5283723

Neighbor

gene id symbol gene type direction distance location
CI01000001_05270301_05279405 AVPR2AB coding upstream 2653 5270301 ~ 5280807 (+)
CI01000001_05223340_05229184 IDH3G coding upstream 53801 5223340 ~ 5229659 (+)
CI01000001_05075984_05079729 NA coding upstream 203729 5075934 ~ 5079731 (+)
CI01000001_05071017_05075175 NA coding upstream 207707 5069303 ~ 5075753 (+)
CI01000001_05051664_05059659 MFSD4B coding upstream 223520 5051529 ~ 5059940 (+)
CI01000001_05365373_05384192 MYH7B, MYH7BA, MYH7BB coding downstream 81439 5365162 ~ 5384238 (+)
CI01000001_05401665_05402500 EMP3B, EMP3 coding downstream 117942 5401665 ~ 5402771 (+)
CI01000001_05427300_05427801 NA coding downstream 143509 5427232 ~ 5427818 (+)
CI01000001_05478200_05480124 NA coding downstream 194477 5478200 ~ 5480504 (+)
CI01000001_05487409_05494726 NA coding downstream 203579 5487302 ~ 5495336 (+)
G15846 NA non-coding upstream 69208 5212269 ~ 5214252 (+)
G15879 NA non-coding upstream 85705 5197546 ~ 5197755 (+)
G15878 NA non-coding upstream 86219 5197025 ~ 5197241 (+)
G15877 NA non-coding upstream 86532 5196661 ~ 5196928 (+)
G15875 NA non-coding upstream 100100 5183072 ~ 5183360 (+)
G15839 NA non-coding downstream 33763 5317486 ~ 5317993 (+)
G15854 NA non-coding downstream 53397 5337120 ~ 5341892 (+)
G15911 NA non-coding downstream 73907 5357630 ~ 5357902 (+)
G15915 NA non-coding downstream 127760 5411483 ~ 5411690 (+)
G15948 NA non-coding downstream 138580 5422303 ~ 5422528 (+)
G15794 NA other upstream 218756 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 1662009 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3612456 1667762 ~ 1671167 (+)
G13051 NA other upstream 4238308 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4791403 483853 ~ 488825 (+)
CI01000001_05279884_05287123 NA other downstream 3026 5279837 ~ 5287698 (+)
G15995 NA other downstream 428162 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2248849 7531541 ~ 7540586 (+)
G17234 NA other downstream 2748401 8032124 ~ 8032483 (+)
G17353 NA other downstream 3932299 9216022 ~ 9228859 (+)

Expression


Co-expression Network