G15817


Basic Information

Item Value
gene id G15817
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5060807 ~ 5061182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17676
CTTGTTTCCCATTTAAATGACTGGATTTTGCCCATGAAAATTCGTCGAAAGGTAAATATAAGCACACTTTAAAAAAAGGGAAAAAAGGTAGTGTACCTTTGTATAAAGCGCAGCTCACACAGAAGTCTCTTTCAAACCAAGCAGTTTTCTGATGGTCAGCGCTGTAGATTTGTGTGAGGAAATCTTTGCCCTCACGCAAAAATCCAGATTGAACGAATTCCTATGGAAATGACTGGATTTTTCCCGCGGTAAATGTGACCGTACCCTATACCAGTATTTTGCTTGAGATGACATCGAATTATGCACTGCTGAGAAATCCTCTAAGAATGTTAGAGGTCATTGCCACACTTTTATAATTAAAATAACACATCTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17676 True 376 lncRNA 0.46 1 5060807 5061182

Neighbor

gene id symbol gene type direction distance location
CI01000001_05051664_05059659 MFSD4B coding upstream 867 5051529 ~ 5059940 (+)
CI01000001_04993860_04998535 NA coding upstream 62046 4993860 ~ 4998761 (+)
CI01000001_04976994_04988795 NFASCB coding upstream 71725 4976347 ~ 4989082 (+)
CI01000001_04962494_04971921 NA coding upstream 88576 4962494 ~ 4972231 (+)
CI01000001_04950531_04960550 NACA, NACA.2 coding upstream 100112 4950531 ~ 4960695 (+)
CI01000001_05071017_05075175 NA coding downstream 8121 5069303 ~ 5075753 (+)
CI01000001_05075984_05079729 NA coding downstream 14802 5075934 ~ 5079731 (+)
CI01000001_05223340_05229184 IDH3G coding downstream 162158 5223340 ~ 5229659 (+)
CI01000001_05270301_05279405 AVPR2AB coding downstream 209119 5270301 ~ 5280807 (+)
CI01000001_05279884_05287123 NA coding downstream 218655 5279837 ~ 5287698 (+)
G15812 NA non-coding upstream 19242 5041366 ~ 5041565 (+)
G15800 NA non-coding upstream 54770 5005822 ~ 5006037 (+)
G15798 NA non-coding upstream 57417 5003170 ~ 5003390 (+)
G15789 NA non-coding upstream 124817 4935371 ~ 4935990 (+)
G15419 NA non-coding upstream 259277 4800973 ~ 4801530 (+)
G15796 NA non-coding downstream 9290 5074401 ~ 5074805 (+)
G15875 NA non-coding downstream 121890 5183072 ~ 5183360 (+)
G15877 NA non-coding downstream 135479 5196661 ~ 5196928 (+)
G15878 NA non-coding downstream 135843 5197025 ~ 5197241 (+)
CI01000001_03618075_03620436 NA other upstream 1439356 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 3389803 1667762 ~ 1671167 (+)
G13051 NA other upstream 4015655 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 4568750 483853 ~ 488825 (+)
G12614 NA other upstream 4749866 309144 ~ 310941 (+)
G15794 NA other downstream 36 5061218 ~ 5064704 (+)
G15995 NA other downstream 650703 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 2471390 7531541 ~ 7540586 (+)
G17234 NA other downstream 2970942 8032124 ~ 8032483 (+)

Expression


Co-expression Network