G20286 (LOC107581737,LOC107654534)


Basic Information

Item Value
gene id G20286
gene name LOC107581737,LOC107654534
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15149112 ~ 15184873 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU30209
ataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagataatatatgtttatttacaagGTTAACTTAAGCAAGGCTTTGtacaaatgttacaaaatagtTTGACACACATACTCGACCACATAATGTATACACAAGCAATatcagacacacatacacactcatatGAAGTGATTTCACCAACGAGCCGTTACTCAAAGTAGATGAACGTGGGAAGGTGAACACACCACACTGCCTCTTTTGGATCTTAATGTAGTGAGTTACTGGTAGAATTACGCACCTGCTCTAAGCTCGATGGCCTATGTTAAATCTAGTAAAACTGTCACTATCAACACTGTTCCTGTTTGATAACACTGTTTAACCAATACTGCACCGGCACATTTGAAGAATTGGTTCATCTgggacatgaaaacaaaaaaagcactcCGTGGCATGTGAGTCGTGAGGGTCTTGGCAGTAACTTTGGCAACACCGAAAAGCCCCTTTGCCCTGCAGGTGAAGAGATCTGAGTagaagtaaatgtaaatgcgaTTTAACCGAAGGCTTTAAACGGTTCTCTATTTTGTATTCACACGCCAACCTAAAGGGCTGATCACACCGACAGCGATTCGCAGCGACAGAGTGATTGGAGTCATTTTCACTGAAAATGATTCGAGGCAACATAAGCAGAAACAACATTGGTCGCTCAGCTGCATAAAGGAGAGAGATCGTGTTTATGCAAATGAACAGCAATGTGATGAAGCAATAAAAGGGATACGGACCAGGGCTAGGTGAAATTTTCCTTTCAGTTGAAagaaatttaatgcattcaaatttgGCCACGCACTAACGGAAATCAGGCTTACGTAGAACGTACGATTCAAGAAAATTTCAACAGGTAATGTTTTGGGAAATTAGGCGTTTCCACCTTTgtcagtaaaatgaaaaaaagaaaagtactCGGTTTAAAAGGTGGCATCAAGTGAGGCAGATTTTCGCGTCTTGATAACGCTTTCATTTCTCTTTACAAACGTCATTGAGGGCATTTTCACACCTGACCTGCTTGGATCATTTGTTTCAGAAGCTGACACTATTGCCGAAACAATCAGTCTGAGAATGAAATCTGGCCTTATATTCCAACAACCCAAGCTCTAACACAATTCGTAAAGTGAAACGTGTTAATTCAGTAGGTGACAAATAtctcttcattttaaattgttattgctCTTCTCTGAAACAGGTGTATTGCAACAATGCTGTCCCAGTGAAGCATTGATATacgtatacatttatacatatgaGTGTGTGTAACAATTCAATTGAACAGGAACAAGTTGACTCTGACCAGTGAAGGGATAGTTTTATGCACATGTGACGGCAAACCGAATCAATGAGAGAGTCAACATTAACCCCTTTCACACAGTAATACAAGTCTATTTCAGTAAAATTAGCTGAACGACTTTACCggtaaatacaaaaatgtgctGTTTACACAGACAGTGATGTTCCATCTGAAAGTGAAGCACATTTCATGTTAAGTTACCAGTAAACTCTGAGACATTGACCAAGTGACCTCTTAATTTGTTCATTAGACTAGACGTCTCACACCACCGTGTTCTGAACTCAAACACGCTCATACCCGTAATCTTTACTCTGCGTTCACACACAGCATCATTGTGGCTGTTTACTGGTAACGTTACAACTTCTCATACCGGTAAATTCTTCCATCAATTTACCGGTATGAGAAGCTGTCGTTTTTGAAATGACGCGGTTTTTAAAAGTAATCTCCCTGTAATTTACCAGTAAAGTCTGTGCGAAAGGGGCAACTGTAACAATTCAAATCCCTGCTCCTGAACAAAGCAAACAGTCTACAGGTATGAAAATgcccttttttcatttttttttcagctcatcTTAATTCCACTTACTCAATTTTAAAATTTGCTGccttattttaaattctgttcaAATTCCAAAAGTGAACTAGAATTTAAAATCATTCTCAATACAATTCTGAATGGTGCACAATGGTGCTACCAGACACTCCAGCAAAGTCATATTGCTCGGAGGCCGTCTTTAAAAACGCCTCTCAGGCATGCAGCCGCAGCTCCTATATCTTTAAAAggggaaacatcaaattctccaAAACTGTTGGCCAAGCTTACGattgaattttatatttgaattcgCCAGTTAAAACCGACAGCAATCCGACAGTATCGTATATGTGgtttaaaaagcttatttatcaAGCTAGACCAGCCAGTGTGCGCAcagtttctatagcaaccgggACTTCTAACGGCAGCTGCAATGACACGCTCACTTTACCGACTCGCGATTGGCTCTTTTACTCAGAAGGTGGGGCTTCGATCGATTTGTTCCATATTGCGCATTCCATTTTTCCCCATTCAGAACTACACAAGCTACACGTCTTGGTTATTCTGTAGTCTTCGACTATAGTGAGTATGAACGCCCAACGGTCAACGGTACCTGGCAACCATGTAATCACTGTCAGTGTGAGCAGCGTAAACGGACTGAGGACACAACCCAAATCCAGCTCTCTTGGTTCACTAGCCTGTACACACCATCACTGCTACAAGAAATCACGAAAGCGCGAGGTAGGCGGGGCCCGACGTGCAGTAGGGGCTTCAGTCTCTGAGCACACTAGGTGGGACTCTCCAACGTCCTGCTTTTCAATAGGGGAAGGTGAAGCTAGCGGTTTGGGGGGCGGCGCCGGAGCTTTTTTGTCTGAACAGTCCGTAGGGGAGACCACCACGGTGTGCCTCCTCCAAGCCCGTCTCTTTCGACGCGTCTCCGGGGAGAGCTGCTTCCTCAGGCCCACACTGCGGAGATCATCCGCTGAGCCCATTAGACGAGCCCGGACCTGATCCGCCAGGGAACCCTGCCCGGTGGACAACGAGCAGCTTTTATTTCCTAGACCGGCTGCGGATGTTGGCGTGTACTCTTTGCGCACGTTAACCCCTTTAGAAGAGGATCTGGTTTTGGGGGAAGGGGGCGAAGAGGAATCAGGGATTTGATTCGCACCCGACAGCCGTTCTCCCTCTGTAGTGGAGGAGCTGGACAGTTCGGAAAGGTCCACAGAGGGCGCTTTGGCTTTGTCAGCTTTGAGCCGGCGCCGCGCAAGGGTGTCGCACTGAATGAGGCGATGGGAGTTAAAAGAGTGGCGGTTGTGGTGGCGCTGGGAGGCGGTAGATGAGTAAGAGGAGGTGGAGGGAGTAGATGAACGGGCTGCGCTGTCTTCGGGACTGGTTGTGAGGGAAGGAGGAGGCGGAGCGAGGGTGGAGCCTGAGGCTGGCTGCGATTTGCAGTGCGCGTAGAGGAAACTGCGCGGGGCGGTCGGTTCGGGTGAGGCGTGCGAGTTCCGGCTTGGTTTCTCCGGCCTCTCCTGGGTGAGGGAGCGTGAAGCGAATCCGCTTTCGTTATCGGTTTCACTCACCAGTTCGCTATGCTCGTCGTCTGCATCTTCACCCCGCCCCTCTGATGCTAAGCTCCGCCCCAGAGTGGAGAGAGTCGAGTAGCCTGACACAATAGACCGTGCATCATCTCCTCGCCAGCTGCGACCTTTCACTTCAGACCTTTGCTCTTCCTCCTCGCTCAGCAGCACCGCCGGGGCCGCTTCCTCTGTGGAGGAAATGCTGGGAACTACTTCTTCCTTCTGCTCCCGTGCCTTCTGTCTCTCacactcctcctcctcttcctcgtcttcctcctcctcttcttcttcttcatcatcttcttctcCCTCTGCTCTGGGGGCGCAGAAGGATGCGACCTTCCCCATCTCTTGCAGGTCGTCTTTTTCGGAGATGCAGGATTTAACGGGTTCATGCTCGGAGTCATCGTCTGTGCTGCTTCCGAGGAGACGGCCATTAGGCCGCTTCCGCCGTTTGCGTGTCACAGCCGACATAATCGATAACGTCAGGATATCCTTGGCAGTAAAGTCACGTTTGGCTCC

Function

NR:

description
PREDICTED: rho GTPase-activating protein 23-like isoform X8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30209 True 3956 TUCP 0.46 2 15149112 15184873

Neighbor

gene id symbol gene type direction distance location
tmem98 tmem98,LOC107674611,LOC107720031,LOC107738157,LOC107654470 coding upstream 50015 15092956 ~ 15099097 (+)
kcnj19a si:dkey-106c17.3,LOC107654469,LOC107581800,LOC107737881,LOC107674737,LOC107720030,LOC108432058 coding upstream 98675 15029823 ~ 15050437 (+)
asic2 asic2,LOC107654528,LOC107674665,LOC107720021,LOC108411330,LOC107592342 coding upstream 191386 14684646 ~ 14957726 (+)
hrob LOC107721529,LOC107654526,LOC107601306,LOC107720097 coding upstream 470247 14672317 ~ 14678865 (+)
rps11 rps11,LOC107674708,LOC107590366 coding upstream 477553 14669481 ~ 14671559 (+)
zgc:100868 LOC107654462,LOC107738142,LOC107581796 coding downstream 65661 15250534 ~ 15257035 (+)
aldoaa aldoaa,aldoab,LOC107720037,LOC107674678,LOC107581735,LOC107689930 coding downstream 95855 15280728 ~ 15285025 (+)
cln3 cln3,LOC107591583,LOC107737814,LOC107720039,LOC107674677,LOC107654539,LOC107581771 coding downstream 102735 15287608 ~ 15292909 (+)
prpsap2 prpsap2,LOC107737786,LOC107581734,LOC107654541,LOC103393631 coding downstream 108505 15293378 ~ 15300967 (+)
epn2 epn2,LOC107654543,LOC107674690,LOC107720043,LOC107591621 coding downstream 135009 15319882 ~ 15338761 (+)
G20269 NA non-coding upstream 10212 15129681 ~ 15138900 (+)
G20188 NA non-coding upstream 156075 14990229 ~ 14993037 (+)
G20179 NA non-coding upstream 159120 14972299 ~ 14989992 (+)
G20183 NA non-coding upstream 177451 14971012 ~ 14971661 (+)
G20180 NA non-coding upstream 179827 14920245 ~ 14969285 (+)
G20415 NA non-coding downstream 402339 15587212 ~ 15588809 (+)
LOC122334397 NA non-coding downstream 529859 15714732 ~ 15727870 (+)
LOC122334400 NA non-coding downstream 535374 15720247 ~ 15721303 (+)
G20452 LOC107674632,LOC107720067,LOC107591813,LOC107748300 non-coding downstream 677140 15862013 ~ 15864962 (+)
G20465 NA non-coding downstream 687929 15872802 ~ 15873925 (+)
G20172 rps11,LOC107674708 other upstream 477544 14664919 ~ 14671568 (+)
G20167 NA other upstream 526254 14618994 ~ 14622858 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other upstream 533704 14535179 ~ 14615408 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 875803 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 1025984 14120185 ~ 14123128 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other downstream 84927 15269800 ~ 15280113 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other downstream 522063 15706936 ~ 15744194 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other downstream 994747 16179620 ~ 16207846 (+)
LOC122331507 psmg3,LOC107703392 other downstream 1505830 16690703 ~ 16699482 (+)
micall2a micall2,micall2a,LOC107703317,LOC107745593,LOC107568921,LOC107674716 other downstream 1585672 16770545 ~ 16784811 (+)

Expression


Co-expression Network