tmem98 (tmem98,LOC107674611,LOC107720031,LOC107738157,LOC107654470)


Basic Information

Item Value
gene id tmem98
gene name tmem98,LOC107674611,LOC107720031,LOC107738157,LOC107654470
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15092956 ~ 15099097 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235668.1
GTGAGAGCGCGCGTCCAGCAGGACCGAAGTTCACGGCGCGCTCCCGCGCTGGAGATCTCCGTGCCGTCTCCGCCTGTACACCCTAAACGCGCTTCGTTTCGTGGGATAAACGACGTAAAATGGACAGGATATACAGAATCATCTAGCTTTTGCAACTCCAGCCAAACCATTTCCTGAAAATCCTCCTCGTCGTTCTTCATCTGTAACCATGGAGACGGTGGTGATCGTGGCCATAGGTGTACTCGCCACCATCTTCTTGGCATCGTTTGTGGCGCTGGTGGTTGTGTGCCGTCATCGTTACTGCCACCCTCCAGACTTCCTGCACCAGTTTGACTCCAAACCTACAGTGGATCTGATCGGAGCGATGGAGACTCAGAGTGAACCGTCAGAGCtggagctggatgatgtggtCATCACGAATCCTCACATTGAGGCCATGCTGGAGAACGAGGACTGGATCGAAGATGCCTCggGTCTTGTGTCTCACTGCATTGCGATTCTGAAGATATGCCACACTCTCACTGAAAAGCTTGTTGCCATGACGATGGGCTCCGGGGCAAAGGTCAAAGCGCCTGCCAGCCTCAACGACATCATCACCGTGGCCAAACGCATCGCCCGAGGTAAACAGATTAAGAGGGTGGATGACGTGGTTCGATCGATGTACCCTCCGCTAGACCCTATTCTCCTGGATGCCAGGGCCACGGCATTACTATTGTCGGTCAGTCACTTGGTACTGGTGACACGAAACGCCTGTCACATGTCCGGCAGCCTGGACTGGATCGACCAATCACTGCATGCGGCTGAGGATCACATGGTCGTGTTGAGAGAGGCAGCTTTAGCCTCCGAGCCAGAGAGAGGTTTGCCAGAGAGAGAGCAGTCCATCTGAGTCACTCACAGacatactgtatgtacagtacacacattattCAAGAACATGTGCATGAATGCACCTGTAAAGAATATGATATTTAGTGGACATTACCTCAGCACGTCCATAATGTCACTCTTTCACTgcatctcatttttatttctgttacatTCCAGTTTAATCGCTGGTCATACGCTGGATTTATATGTAGATGCTAGTaccaaaaatgtctaaaaaaaatccaaaagaaGAATGTATAAACCAAGCCGTTTTTTATTGGTATTGCTAAGTGTGTTAGTTAAACTGTGATCATGCTGTCGGATATTTTGAgaatcaaatattatataaaccaaaaatggtcaatattttttttagtgtcTCTAATATTTGAGACTAgtattgttttaatcaaatacaatttttcattattagcatcaagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacaaatttatagtctttttgcttttatttgtctttgaaaacacacaaaaaataagatgctgaaatgatttttttttaccatcatACAATCACGTTAAAGGGTACCTCTAACCcaaaaggaaatgttttgtcattaatcacttacccccatgttgttccaaaccagtaaaagctttgttcgtctttggaatacaattgaagatattttggatgaaaaccgggcttgtgactgtcccattgactgctaGGTAATAAACCCTGTCAAAGCCATAATAAACACAGTCAGTGGTTTCAGCtgtactttttgtatggaaagaaaacaaaaataatgagttCATCAGTGTAAATTCACCAGTGTCAATTTGGAGACCATCCTCTATtcagacgatgtctttcatagttttctgcaccttgacagtgttcattatttacagtcaatgggacaatcacaagcctcctggttgtCATCcaaaaaatatcttacattttgCTCTTAAGACAAACAAAGCACAACATGAAGTAactaattaatgacaaaattctCCTACAGCACTTTCGTATTTGTACATTCTctactttttttccctctcatgATGTGCACgctaccattcaaaggtttggggtcagtaatattatgttttaacatttttttaacaaagcctcctatgctcaccaaggctgaatttatttgatcaaaaccactgtaaattatgtaaacaatttatttgagggattaaaataatttacatatattttgagGTATTTTAGTATTTAGCATTGAAATATcgaagtatttatttgaaatagaaatcttttgtaattattaacgtctttactgtcatttttgatccatttaatgcatcccgaagaaacatttttatttctcaaataaaaccccaaacttttgaacagttgaCTAGCTGGTTGTGAACAGTTTGCAGCAAGTAAAACTTACATTCTTTTGTTCACCTGCTATCTAGCCATGGCATGTCATTTTTCACCAGAGTCACATGAAGTCTAAATCCACACTAATTCCTTCCCTCAACCCCCACCACACTTTCAACAGCCACACACATTCAAGACTCTCTCATTTCATGTATTATATTCAAATTTCAAGTTTCGATGCTAAGAATATATTGCACATTCAGTTATTGATTGAGTATTTCCTCTTTTCATTTCCTCTCGGAGCAACTTTGTTACTGACAtttcttgtttgtttctctgtttgTTCTCTGATTCTCAAACGGTTTATGCATTTGAGATTTGTAAAGGTGAATAAATGTTTCACAGCGAAAAGATGtcatgatatttttattttaaaataaacattactaaATTCAGCTGTAAGTTCAGTGAAACAATCGGACCTCACATGTGCTGCTTTGTGTGGAGAGAGGAGGCAGACAGggagagatgaagaaagagGGAGGAGAAACAGCTGCAGTGGAGGAAGGgagggaagaaaagaaaaacacgaCCGCTATTTCTCAAAGTCAGAGTAAAACAGTTCTGTCTAGCTTTGAGTAGAAAGCTTTTGGCCAAAACGAGCGCTGGACAAtaggcattaaaaaaagcagcgGACTGAAaggacacacactcacac

Function

symbol description
tmem98 Predicted to be located in endoplasmic reticulum membrane; extracellular region; and plasma membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in nanophthalmos. Orthologous to human TMEM98 (transmembrane protein 98).

NR:

description
PREDICTED: transmembrane protein 98

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235668.1 True 2975 mRNA 0.40 7 15092956 15099097

Neighbor

gene id symbol gene type direction distance location
kcnj19a si:dkey-106c17.3,LOC107654469,LOC107581800,LOC107737881,LOC107674737,LOC107720030,LOC108432058 coding upstream 42519 15029823 ~ 15050437 (+)
asic2 asic2,LOC107654528,LOC107674665,LOC107720021,LOC108411330,LOC107592342 coding upstream 135230 14684646 ~ 14957726 (+)
hrob LOC107721529,LOC107654526,LOC107601306,LOC107720097 coding upstream 414091 14672317 ~ 14678865 (+)
rps11 rps11,LOC107674708,LOC107590366 coding upstream 421397 14669481 ~ 14671559 (+)
LOC122342191 NA coding upstream 422276 14670596 ~ 14670680 (+)
zgc:100868 LOC107654462,LOC107738142,LOC107581796 coding downstream 151437 15250534 ~ 15257035 (+)
aldoaa aldoaa,aldoab,LOC107720037,LOC107674678,LOC107581735,LOC107689930 coding downstream 181631 15280728 ~ 15285025 (+)
cln3 cln3,LOC107591583,LOC107737814,LOC107720039,LOC107674677,LOC107654539,LOC107581771 coding downstream 188511 15287608 ~ 15292909 (+)
prpsap2 prpsap2,LOC107737786,LOC107581734,LOC107654541,LOC103393631 coding downstream 194281 15293378 ~ 15300967 (+)
epn2 epn2,LOC107654543,LOC107674690,LOC107720043,LOC107591621 coding downstream 220785 15319882 ~ 15338761 (+)
G20188 NA non-coding upstream 99919 14990229 ~ 14993037 (+)
G20179 NA non-coding upstream 102964 14972299 ~ 14989992 (+)
G20183 NA non-coding upstream 121295 14971012 ~ 14971661 (+)
G20180 NA non-coding upstream 123671 14920245 ~ 14969285 (+)
LOC122342192 NA non-coding upstream 426427 14666446 ~ 14666529 (+)
G20269 NA non-coding downstream 30584 15129681 ~ 15138900 (+)
G20415 NA non-coding downstream 488115 15587212 ~ 15588809 (+)
LOC122334397 NA non-coding downstream 615635 15714732 ~ 15727870 (+)
LOC122334400 NA non-coding downstream 621150 15720247 ~ 15721303 (+)
G20452 LOC107674632,LOC107720067,LOC107591813,LOC107748300 non-coding downstream 762916 15862013 ~ 15864962 (+)
G20172 rps11,LOC107674708 other upstream 421388 14664919 ~ 14671568 (+)
G20167 NA other upstream 470098 14618994 ~ 14622858 (+)
G20148 LOC107721478,LOC107654521,LOC107674594 other upstream 477548 14535179 ~ 14615408 (+)
abcc1 abcc1,LOC107721490,LOC107654509,LOC107720005,LOC107688147,LOC107601224,LOC107590430 other upstream 819647 14255490 ~ 14273309 (+)
smim22 si:ch1073-443f11.2,smim22,LOC107688153,LOC107721520,LOC107601279 other upstream 969828 14120185 ~ 14123128 (+)
G20286 LOC107581737,LOC107654534 other downstream 50015 15149112 ~ 15184873 (+)
G20295 plcd3,plcd3a,LOC107674588,LOC107581738,LOC107654535,LOC107591554,LOC108432051 other downstream 69241 15168338 ~ 15169258 (+)
zgc:165423 LOC107738133,LOC107654537,LOC107581795 other downstream 170703 15269800 ~ 15280113 (+)
fscn1a fscn1a,LOC107703419,LOC107742378,LOC107581720,LOC107674660,LOC107720060 other downstream 607839 15706936 ~ 15744194 (+)
gna12a gna12,gna12a,LOC107703403,LOC107753491,LOC107674729,LOC107758336 other downstream 1080523 16179620 ~ 16207846 (+)

Expression


Co-expression Network