LOC122342055 (pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295)


Basic Information

Item Value
gene id LOC122342055
gene name pik3r6,LOC107719336,LOC107703883,LOC107563351,LOC107728708,LOC107583295
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24039902 ~ 24051913 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU34051
AAAAATACAACCCACAAGAATTTCATGGTGCAGTCGTGTCAATCAATTACAGAAAGgcCTCAATAAGTGACAGAGAAAAGGAGATGGGGATGTCTTTACCGACGAGTGGCATGTTGATCAGTGTCGTGCCTTCATGCAGAGTCAGAAGTCTGCACAGTGTCAGCATAAGTTTCCAAGATACGAATCCCACAAGGCCCAGCACACATTCAGTCAGAGCTGTTGGTGCCAATATCAGGGTTCTGGAGCAGCGGACATTCACAGTCTGCTTAGATAAAGACCCACGTAAAACATTCAAGAATGTCCAGAGCATTGAAGTTTCTCCATGCTTGGACCCGGGATACACTCACCAGCCGAGTGCAAAGTCCAAGTACAGTTTGGGAGATGGAGGTGAACCTCTGGGCAAATACGTGAACAAGACCCTCACGCTGCCGATCAACACCTTCTGTGGCACTGAGCAATGACGATACGCCTCCAATTTAGGATAGCAGAGCTTGAGTCACGAGACGAACTGAAA
>TU34052
aggcCTCAATAAGTGACAGAGAAAAGGAGATGGGGATGTCTTTACCGACGAGTGGCATGTTGATCAGTGTCGTGCCTTCATGCAGAGTCAGAAGTCTGCACAGTGTCAGCATAAGTTTCCAAGATACGAATCCCACAAGGCCCAGCACACATTCAGTCAGAGCTGTTGGTGCCAATATCAGGGTTCTGGAGCAGCGGACATTCACAGTCTGCTTAGATAAAGACCCACGTAAAACATTCAAGAATGTCCAGAGCATTGAAGTTTCTCCATGCTTGGACCCGGGATACACTCACCAGCCGAGTGCAAAGTCCAAGTACAGTTTGGGAGATGGAGGTGAACCTCTGGGCAAATACGTGAACAAGACCCTCACGCTGCCGATCAACACCTTCTGTGGCACTGAGCAATGACGATACGCCTCCAATTTAGGATAGCAGAGCTTGAGTCACGAGACGAACTGAAA
>XM_043235839.1
GGAGTTGCTAGACTACATAGAGCAACAGTTTTACGCGTAGCAGACATGAAGGACCTTTCTAACTGACTCATCCATGTCATGTGGATGTTATCTGAGCTGTGAACCCCACCATGGAAGAAACATTCGGTGGCGTGTCCTCAGTCGTGGAGTCCAGCCTCTACCACACCGTCCATTCCATCCTCAGAGAGCTGGACTGTAAACCTCAGGCTGGATCAGTCTGCAATAAAGgcatGTTGAGATGGACCCTGCATAACAGGGTggacaaaaacccatcgatcagTGTCCCTCTTTTGAGGGTTCTCATAAAAGAGCTCGAAAAGGCGGAGAGAATCGATTCCAAGATTCGCATTATTCCTTTACTTCACACGCTTCTCTACACGGTCCTGCAGTCTCTATTTATTCCAGAAGATCTGTATCGGAGGATGTATTTTTGCCTGAAAAGTTTAGTTACTCTACCCGAACCCTACTGCTCAATCGCTCTCAACTACGCAAGACAGATGAAAATGGAACAAAACGCGCCAGgaaTGCTGTATCAGAGGAGAGTCAGCGCCGAACACAATCTATGCAATGATCTTTATCCGCTCCATGAGAAggtgtttgtgtttgtagacCCTGCCgtgtttcctctgtctctggtgAGCGCGCTCAAGGCCGACGTGGAGCGTGCGGACCCTGGCAGAAGCTCAATGATCTACAAGCGCAGAGTTTTACTGCACACAATGCTAGCTGCGTTAGGAAAGAAGTGCCAGGCTGGCCAGCTATCACAGTCTCTAGAGcatttaggTGAAGAGCTGGAGCTCCACTTCCAGGATCTCACCACCATCCTagaacagaaaacagaagatgCACCCTCTGACGATAATCAGTACAAAACTAGATTACTAGAGATCTACCAAGACATCCTGTCTGCTGCCAAAGatttgtcaTGTCCAGCCTCACAAGCAGAAACTCAGCTGCCCAGTCCTGAGGTCAGCTTCCACATCTGGACCAAAGAGGATGAGATATgGAACGAGCTGGTTAACTTTGCACTGATGGTTCCTGCGGACAGAAACTCTGCTTGTCTGGATGAGGATGAGCTGAAGCGCACCTCAGTCGTGTCCACCGTGTCCACGGACAGCGGCATAGAGGGAGACATGCCCATCAGCGAGCTCTCCTCCATGATGCTGGAGTCTCAGGGAGGCCCAGAGGAGCAGAGCAGCTCTCAGTCCTTCTGCAGGAGGCCGTGCGTGCGATGCCCCAAAGCTGGCAACCGAATGACGCTCATGATGGAGGCTATCAAGGGCAACGGAGCATACAGCCTCGGTAAAGAGGAAAGGAACCTCACCGCTCGGATCCTGGTAATGGGAGACGACAGAACGCTAGGACGGCTGGCCAGAACTCTGTTCGTGCTCAGGAAAAGGGAGGCGCGACATCTGCTGCTGACAAAGAAAGTGAACATGGAGATGTATTACATTCCGGTGACTGACCAGACGCTTTCTCCGTTCATCCAGGAAGGTGTTCCTGAAGACATGCTGACACTGGCAGGATATTTGGGAGGCTTGGATCCGTGGTACGACTGCAACATCAACAGTTTGGGAGCCATGATAATAAAACTGGCTCAGATgAAGTCAACTCAGAGCGAATCTTCAGACCCCAACACCTTCCTGTTAGATATCATCTCATACTACACGCGGCGTGTCAGTCAGCATCTGCACCTTCCCATCTACTCTGTCAAGATATGCTTCTCCAGCCTCAGTAGCACCACAGTGGAGGAGGTGTTTGTGGCCCAGCTCACAATGGACTTTCCCGAGGTCAAACGCTACAGAGCCACATTTAAAGACACGATTAAAGGTTCAAAAGCGTTACAAAAATACAACCCACAAGAATTTCATGGTGCAGTCGTGTCAATCAATTACAGAAAGgcCTCAATAAGTGACAGAGAAAAGGAGATGGGGATGTCTTTACCGACGAGTGGCATGTTGATCAGTGTCGTGCCTTCATGCAGAGTCAGAAGTCTGCACAGTGTCAGCATAAGTTTCCAAGATACGAATCCCACAAGGCCCAGCACACATTCAGTCAGAGCTGTTGGTGCCAATATCAGGGTTCTGGAGCAGCGGACATTCACAGTCTGCTTAGATAAAGACCCACGTAAAACATTCAAGAATGTCCAGAGCATTGAAGTTTCTCCATGCTTGGACCCGGGATACACTCACCAGCCGAGTGCAAAGTCCAAGTACAGTTTGGGAGATGGAGGTGAACCTCTGGGCAAATACGTGAACAAGACCCTCACGCTGCCGATCAACACCTTCTGTGGCACTGAGCAATGACGATACGCCTCCAATTTAGGATAGCAGAGCTTGAGTCACGAGACGAACTGAAACCTCATGCCTCTCAGAGGCTTTTAGTGTTTTTCGGGGCGTGTGCATTTCC

Function

symbol description
pik3r6 Predicted to enable 1-phosphatidylinositol-3-kinase regulator activity. Predicted to contribute to phosphatidylinositol-4,5-bisphosphate 3-kinase activity. Involved in positive regulation of angiogenesis and regulation of natural killer cell mediated cytotoxicity. Predicted to be located in membrane. Predicted to be part of phosphatidylinositol 3-kinase complex, class IB.

NR:

description
PREDICTED: phosphoinositide 3-kinase regulatory subunit 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34051 False 514 TUCP 0.48 5 24050239 24051863
TU34052 False 460 TUCP 0.49 4 24050738 24051863
XM_043235839.1 True 2409 mRNA 0.50 21 24039902 24051913

Neighbor

gene id symbol gene type direction distance location
mchr1b mchr1b,LOC107719342,LOC107672125,LOC107672690,LOC107602308 coding upstream 162228 23873131 ~ 23877674 (+)
trnas-aga_1 NA coding upstream 203722 23836099 ~ 23836180 (+)
il2rb il2rb,LOC107583317,LOC107695139 coding upstream 334464 23696193 ~ 23705438 (+)
LOC122341829 LOC107672151,LOC107583318,LOC105890774,LOC103393291,LOC107695138,LOC103147375,LOC105029658,LOC107748796,LOC102224681 coding upstream 352613 23684853 ~ 23687289 (+)
mpst mpst,zgc:162544 coding upstream 355191 23682485 ~ 23684711 (+)
LOC122342045 mfsd6l,LOC107719337,LOC107583315,LOC107728393,LOC107563357,LOC107703882 coding downstream 9 24051922 ~ 24056391 (+)
zgc:171844 zgc:171844,LOC107672688,LOC107719339,LOC107583313,LOC107703875 coding downstream 6780 24058693 ~ 24071844 (+)
tom1 LOC107672685,LOC107583252,LOC107719328,LOC107563358,LOC107703898 coding downstream 32073 24083986 ~ 24094610 (+)
LOC122342047 gcat,LOC107703894,LOC107670921 coding downstream 86630 24138543 ~ 24142121 (+)
LOC122342038 mcm5,LOC107703892,LOC107670920 coding downstream 90903 24142816 ~ 24148359 (+)
G22921 NA non-coding upstream 133645 23904175 ~ 23906257 (+)
G22865 NA non-coding upstream 147908 23891597 ~ 23891994 (+)
G22863 NA non-coding upstream 153296 23886242 ~ 23886606 (+)
G22857 NA non-coding upstream 168725 23870795 ~ 23871177 (+)
G22833 NA non-coding upstream 234413 23802176 ~ 23805489 (+)
LOC122342062 NA non-coding downstream 29604 24081517 ~ 24083484 (+)
G22957 NA non-coding downstream 29653 24081566 ~ 24094595 (+)
LOC122342058 NA non-coding downstream 48937 24100850 ~ 24107752 (+)
G22959 NA non-coding downstream 48947 24100860 ~ 24213281 (+)
G22963 NA non-coding downstream 65007 24116920 ~ 24120278 (+)
c1qtnf6a c1qtnf6,c1qtnf6a,mgat3a,LOC107695119,LOC107723613,LOC107672153,LOC107583300,LOC107748818,LOC107580620,LOC107695120 other upstream 318183 23709503 ~ 23721719 (+)
zmp:0000000912 LOC107748810,LOC107695116,LOC107583322,LOC107695109,LOC107583307,LOC107709636,LOC107672113,LOC107602301 other upstream 608136 23424621 ~ 23431766 (+)
LOC122341907 NA other upstream 631088 23403441 ~ 23408814 (+)
LOC122341898 LOC107662363 other upstream 677960 23343964 ~ 23361942 (+)
dnal4a dnal4a,dnal4,LOC107662365,LOC107585028,LOC107690743,LOC107740666,LOC107710037 other upstream 696262 23338379 ~ 23343640 (+)
G22958 NA other downstream 43111 24095024 ~ 24097159 (+)
G22996 LOC107703883,LOC107563351,LOC107719336,LOC107583295 other downstream 382142 24434055 ~ 24439463 (+)
G22953 mfsd6l,LOC107719337,LOC107583315,LOC107563357,LOC107728393,LOC107703882 other downstream 394965 24446878 ~ 24449289 (+)
mcm5 mcm5,LOC107703892,LOC107670920,LOC107719335 other downstream 473367 24525280 ~ 24530769 (+)
G23026 LOC107559242,LOC107758098,LOC107658707,LOC107728516,LOC107695967,LOC107568243 other downstream 669613 24721526 ~ 24811577 (+)

Expression


Co-expression Network