G18816


Basic Information

Item Value
gene id G18816
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10087959 ~ 10088510 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU21129
TTTTTTTTTATTTGTAGTTCTAAACGAATCTTCGTCCACAGCGCAATGTGTTATGGGCAATATTAGCCGTTACACCCTGTCCTAACCAGACGCGACGCGATGCGATAAAGGGTATCTAATGGAGTTTTTGTTCTAACCAGTCGCGACGGCGACATGCGACGGTTCTATTTTAGAAACGGTTTCTATTTCTCCGCGGCTGGAACAACAACACAAAGGCAATGATAATATCAGGTACTGTTTATGTGCTTTATTTAATGTTAAAAGCGTCTAATGTGAGTTTGAATATCATTCTGTTCCCAGCTTTTTAGCTGTAATGAAAACAACACTGGCTAATTCACCTCAGATCTTGAAAATAAATAAATGGGCACAAGAACGTTCAAATTGTCAACCCACTGCGAACAAACTAGTATAGTCCTATTCTATGAAAAGATTGGTTCAGTCACTCCGTATGTACTTTAAATAATGTTTAAATGGTGTAATATTTATGAATTTTACTATGTACTTGCCCATTTCATTGTGTCTGCTGTGCTCTTGCCGAGAGAGCCCGCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21129 True 552 lncRNA 0.39 1 10087959 10088510

Neighbor

gene id symbol gene type direction distance location
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding upstream 6780 10072627 ~ 10081179 (+)
CI01000001_09946111_09958162 NA coding upstream 129713 9944120 ~ 9958246 (+)
CI01000001_09932205_09934551 NA coding upstream 152787 9931155 ~ 9935172 (+)
CI01000001_09782626_09784851 NA coding upstream 302775 9782626 ~ 9785184 (+)
CI01000001_09582178_09593275 PTPN22 coding upstream 494676 9582178 ~ 9593283 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding downstream 4392 10092902 ~ 10105699 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding downstream 52680 10141190 ~ 10148058 (+)
CI01000001_10150798_10152858 MIPA coding downstream 61863 10150373 ~ 10152938 (+)
CI01000001_10321783_10325266 NA coding downstream 233137 10321647 ~ 10325305 (+)
CI01000001_10328133_10329110 NA coding downstream 239530 10328040 ~ 10329110 (+)
G18821 NA non-coding upstream 22275 10034276 ~ 10065684 (+)
G18819 NA non-coding upstream 54952 10032772 ~ 10033007 (+)
G18818 NA non-coding upstream 56234 10031518 ~ 10031725 (+)
G18817 NA non-coding upstream 58268 10029454 ~ 10029691 (+)
G18807 NA non-coding upstream 61532 10026202 ~ 10026427 (+)
G18839 NA non-coding downstream 30541 10119051 ~ 10119256 (+)
G18840 NA non-coding downstream 31802 10120312 ~ 10120610 (+)
G18850 NA non-coding downstream 43618 10132128 ~ 10132344 (+)
G18851 NA non-coding downstream 44040 10132550 ~ 10132753 (+)
G18815 NA non-coding downstream 70637 10159147 ~ 10164994 (+)
CI01000001_09435836_09436037 NA other upstream 649896 9435836 ~ 9436373 (+)
G17354 NA other upstream 847282 9234463 ~ 9240677 (+)
G17353 NA other upstream 859100 9216022 ~ 9228859 (+)
G17234 NA other upstream 2055476 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2547373 7531541 ~ 7540586 (+)
G18896 NA other downstream 151390 10239900 ~ 10241492 (+)
G18873 NA other downstream 168602 10223879 ~ 10260714 (+)
G18872 NA other downstream 182636 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 305047 10394851 ~ 10396705 (+)
G18937 NA other downstream 386474 10474984 ~ 10476389 (+)

Expression


Co-expression Network