G169516


Basic Information

Item Value
gene id G169516
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 14058010 ~ 14135254 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU251001
cctttttaaacaattttccatcattcattttcaaaatatacataaatgtgcacaaaaaatCTTACAAAATTCAGTCCAAAGCGGATGAAGACCGGAGCGTGTGGAGACTGCTGTGTTTGATCTGAGGAACATCTTCAGAGACGTGTAGAAGAAGAGTGACGTTCAGGGTCACGTGACATCTGACCGAGACTCTCCTGTCAATCAAACCCTCCTCAACAACCTCAGACCTGAGCTCATCTGACCCACGATGCATCAGTGCTTCCCAGGAGTCTCCGGCGGCGGATCTGTGTGA
>TU251002
cctttttaaacaattttccatcattcattttcaaaatatacataaatgtgcacaaaaaatCTTACAAAATTCAGTCCAAAGCGGATGAAGACCGGAGCGTGTGGAGACTGCTGTGTTTGATCTGAGGAACATCTTCAGAGACGTGTAGAAGAAGAGTGACGTTCAGGTCACGTGACATCTGACCGAGACTCTCCTGTCAATCAAACCCTCCTCAACAACCTCAGACCTGAGCTCATCTGACCCACGATGCATCAGTGCTTCCCAGGAGTCTCCGGCGGCGGATCTGTGTGAGTCTCTGTCCCGCGGATCTGGGTGGAGGAGACGGAGACATGGAGCAGCCCGATGAAGAGCTGAGTCTCAGCGTCTCCGACCGAACCGACCAATCAGGAGAGCCTCCGGTAATGTCATCACTGCTCAGACTGTGACGGCCTTCATCTTCATCGCTGTGGTGGATCCTCGTCACCTGCGGCTCACGCTCCTTCTCCATAAACAACAGACGTCCGTGCTCGATCCTCCAGGTTCTGAGTTCATGAAGCACATCTCAAGAGTGGTTTTGAGTGTGTTTCAGGGGCTCGTCTCTTCCCTCGTGTTTTCAGGAAGAGAGCTGGGACGGGTTTGAGGAGCAGAGTTCTGGAGCTGGACCGATGGACCGATGGACAGATTCTTGTTTTGATgggctgatatatatatatatatataataattgttgaCCATGTTCATGTACGGTATTCAGCCTTTATTCTCTGTCTCAGCGCTCGAGCAGCTTGCAGAGGATTCCCACACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251001 False 292 lncRNA 0.46 2 14058644 14135254
TU251002 True 786 lncRNA 0.49 2 14058010 14135254

Neighbor

gene id symbol gene type direction distance location
rfwd3 rfwd3,LOC107677830,LOC107688729,LOC107723989,LOC107572234,LOC107754982,LOC107574413 coding downstream 366306 13683352 ~ 13691704 (-)
glg1a glg1a,LOC107559147,LOC107688714,LOC107677828,LOC108428438 coding downstream 375211 13662920 ~ 13682799 (-)
si:dkey-234i14.2 LOC107754985,LOC107677826,LOC107572228,LOC107559149 coding downstream 401524 13642308 ~ 13656486 (-)
urahb LOC107688889,LOC107723959,LOC107559139 coding downstream 416068 13640592 ~ 13641942 (-)
tdrd12 LOC107677829,LOC107559140,LOC107570649,LOC107688857,LOC107688849,LOC107754978 coding downstream 418676 13625224 ~ 13639334 (-)
irf7 LOC107675276,LOC107562829 coding upstream 47822 14183076 ~ 14188343 (-)
hic1l LOC107707545,LOC107675304,LOC107562834,LOC107558318,LOC107709953,LOC107675382 coding upstream 100529 14235783 ~ 14243209 (-)
LOC122330315 LOC107675385,LOC107558317,LOC107707546,LOC107675305,LOC107562826,LOC107709937 coding upstream 108192 14243446 ~ 14256791 (-)
LOC122330318 NA coding upstream 121863 14257117 ~ 14261412 (-)
LOC122330316 mlkl coding upstream 126250 14261504 ~ 14266148 (-)
G169506 LOC107675371,LOC107573038,LOC107574376 non-coding downstream 15682 14025400 ~ 14042328 (-)
G169510 NA non-coding downstream 36526 14010885 ~ 14021484 (-)
G169490 LOC107687028 non-coding downstream 83392 13806085 ~ 13974618 (-)
G169493 LOC107687028 non-coding downstream 104719 13802856 ~ 13953291 (-)
G169526 NA non-coding upstream 11356 14146610 ~ 14158432 (-)
LOC122330457 NA non-coding upstream 30394 14165648 ~ 14166969 (-)
G169533 NA non-coding upstream 34614 14169868 ~ 14170585 (-)
G169536 NA non-coding upstream 39323 14174577 ~ 14174993 (-)
G169554 NA non-coding upstream 173101 14308355 ~ 14308776 (-)
LOC122330425 NA other downstream 65161 13992252 ~ 13992849 (-)
LOC122331290 NA other downstream 68097 13989336 ~ 13989913 (-)
G169503 si:dkey-234i14.9 other downstream 86006 13971429 ~ 13972004 (-)
LOC122330416 NA other downstream 125336 13932125 ~ 13932674 (-)
G169495 NA other downstream 162410 13895050 ~ 13895600 (-)
G169622 NA other upstream 552192 14687446 ~ 14688589 (-)
G169631 NA other upstream 618920 14754174 ~ 14754827 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other upstream 893847 15029101 ~ 15052924 (-)
G169808 NA other upstream 1113701 15248955 ~ 15583635 (-)
LOC122331105 abcc8,LOC107675473 other upstream 1367367 15502621 ~ 15550803 (-)

Expression


Co-expression Network