G169510


Basic Information

Item Value
gene id G169510
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 14010885 ~ 14021484 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU250990
TTGAGAATCTCCAGTGAGTAGTTTGGATCCTTCAGTTTGTCAGAGAGCAGCTTGACTCCTGATtctcctgggtgattgtagctcaggtccagctctctcaggtgtgaggggtttgaactcagagctgaagacagatAACGACAGCCTTCTTCTGTCACCATACAACCTGAcaaactacaaacacacaacagaCTTCATCGTATGTCAAGCTTTCGACTCAAATGCCTGAGAAATCACTGTTGACAGGTCATTCTCTCTAAAGGGAGTGCAAGCCAAGCAGTGTAATGCAACTTCTTGAAACAggctctttaaaaataatattttttaacttgaCACAGCACATTAAAAACTCAATTCTGAGAGCTGAACTTGCTAACATTGTTTACACTCTGTATTTGCTGCCATTGGGTTCCATTTTGTCCAAATATAGAGTATCATTCCACCTATATGACACCCAACTATATCTCACttgaatgactgaatgactcAAGCTCCATAGGGGTTTTGTTAGCTTGTTTTCATTAAGTGAAAATTTGCCtttcacacaatttttttaGCCCTAAATGAGAGTAAAAccaaagttttatagtttggtCAAAGTGATCCCTATGATTTTGGTAAACTGGACCTCTGTGTTTTAAGTTCTCATTTTACTCTGtgtgaaaaatatctaaaatatctttgaTTAACAAATTCATGCTGTTGtcaaaacctgtttttttatcatttatggcATCTTACAACAGTCAAaccttttttcttctcaaaaaacattgaattaactgcatttattacatCACGCCTCGATTTTTGCAATTCATTCTGTTATGGAGCTAATCAATCATTGATTGGACGACTTCAAATGGATATCATTGGATACCAGTTAAACTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250990 True 894 lncRNA 0.37 2 14010885 14021484

Neighbor

gene id symbol gene type direction distance location
rfwd3 rfwd3,LOC107677830,LOC107688729,LOC107723989,LOC107572234,LOC107754982,LOC107574413 coding downstream 319181 13683352 ~ 13691704 (-)
glg1a glg1a,LOC107559147,LOC107688714,LOC107677828,LOC108428438 coding downstream 328086 13662920 ~ 13682799 (-)
si:dkey-234i14.2 LOC107754985,LOC107677826,LOC107572228,LOC107559149 coding downstream 354399 13642308 ~ 13656486 (-)
urahb LOC107688889,LOC107723959,LOC107559139 coding downstream 368943 13640592 ~ 13641942 (-)
tdrd12 LOC107677829,LOC107559140,LOC107570649,LOC107688857,LOC107688849,LOC107754978 coding downstream 371551 13625224 ~ 13639334 (-)
irf7 LOC107675276,LOC107562829 coding upstream 161592 14183076 ~ 14188343 (-)
hic1l LOC107707545,LOC107675304,LOC107562834,LOC107558318,LOC107709953,LOC107675382 coding upstream 214299 14235783 ~ 14243209 (-)
LOC122330315 LOC107675385,LOC107558317,LOC107707546,LOC107675305,LOC107562826,LOC107709937 coding upstream 221962 14243446 ~ 14256791 (-)
LOC122330318 NA coding upstream 235633 14257117 ~ 14261412 (-)
LOC122330316 mlkl coding upstream 240020 14261504 ~ 14266148 (-)
G169490 LOC107687028 non-coding downstream 36267 13806085 ~ 13974618 (-)
G169493 LOC107687028 non-coding downstream 57594 13802856 ~ 13953291 (-)
LOC122330424 NA non-coding downstream 140166 13870205 ~ 13870719 (-)
LOC122330415 igl4v8 non-coding downstream 151266 13781946 ~ 13859619 (-)
LOC122330432 NA non-coding downstream 199798 13810577 ~ 13811087 (-)
G169506 LOC107675371,LOC107573038,LOC107574376 non-coding upstream 3916 14025400 ~ 14042328 (-)
G169507 LOC107659785,LOC107573038,LOC107571418 non-coding upstream 17242 14038726 ~ 14109084 (-)
G169516 NA non-coding upstream 36526 14058010 ~ 14135254 (-)
G169505 LOC107675371,LOC107573040,LOC107573038 non-coding upstream 85167 14106651 ~ 14118319 (-)
G169526 NA non-coding upstream 125126 14146610 ~ 14158432 (-)
LOC122330425 NA other downstream 18036 13992252 ~ 13992849 (-)
LOC122331290 NA other downstream 20972 13989336 ~ 13989913 (-)
G169503 si:dkey-234i14.9 other downstream 38881 13971429 ~ 13972004 (-)
LOC122330416 NA other downstream 78211 13932125 ~ 13932674 (-)
LOC122330422 NA other downstream 111045 13832814 ~ 13899840 (-)
LOC122331294 NA other upstream 62224 14083708 ~ 14087925 (-)
G169622 NA other upstream 665962 14687446 ~ 14688589 (-)
G169631 NA other upstream 732690 14754174 ~ 14754827 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other upstream 1007617 15029101 ~ 15052924 (-)
G169808 NA other upstream 1227471 15248955 ~ 15583635 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G14326 NA non-coding NC_053113.1 CM020910.1 5259491 ~ 5304895 (+)