LOC122330415 (igl4v8)


Basic Information

Item Value
gene id LOC122330415
gene name igl4v8
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 13781946 ~ 13859619 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2651
gcttcagtgctctgagagtgtttatagtgctgtgagtttaacacttcatgactgagagcagaacacaacacaatcttcatcatcacacaagactcaactactacaatgaacaacatcctcatcctcatctggactcTGACTCTCTGTATTCAGGAGATCTGGGGACAAGTGACAGTGACTCAGAATCcagaaataaaatccatcaaacAAGGAGAAACTGTTACAATCAGCTGTAAAACCAGTCAGCCGATTTCTGGCTGTAGTAACTGTGTGTCTTGGTATcagcagaaacctggagaagctcctaaactcctcatTTATGGCATAAGAAGCCTTTAttcaggaactccatctagattcagtggaagtggatcaAGCTAtggaagtgatttctctctgaccatcagtggagtccagactgaagatacaggagattattactgtcagagtgaACACTATATCAGTGGTAGttGGCTgTACACTTTCGGTGGAGGAACTAAACTGGTGCTCGCTGGTCCCACAGAGAAGCCCTCGTGTCTCTGCTGCCGCCCTCTTCTCTGCAGATCTCTGGAGACTCAGCCGCACTGCTCTGCCTGCTCAGCTCTTACTCTCCACAGGGGCGCAGGTGAGCTGGACGCTGGACGACTCAGAGGTCACCGAAGGGGTCGTGACCAGCGCAGAGAGCGAGCGGGACGGCCTCTACAGCCGCAGTAGCGTCCTGACCTCAGCAAAGCACGCTGGGAAAAGGGAG

Function

symbol description
igl4v8 Predicted to be involved in immune response. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space.

NR:

description
immunoglobulin light chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2651 True 751 V_gene_segment 0.49 5 13781946 13859619

Neighbor

gene id symbol gene type direction distance location
rfwd3 rfwd3,LOC107677830,LOC107688729,LOC107723989,LOC107572234,LOC107754982,LOC107574413 coding downstream 90242 13683352 ~ 13691704 (-)
glg1a glg1a,LOC107559147,LOC107688714,LOC107677828,LOC108428438 coding downstream 99147 13662920 ~ 13682799 (-)
si:dkey-234i14.2 LOC107754985,LOC107677826,LOC107572228,LOC107559149 coding downstream 125460 13642308 ~ 13656486 (-)
urahb LOC107688889,LOC107723959,LOC107559139 coding downstream 140004 13640592 ~ 13641942 (-)
tdrd12 LOC107677829,LOC107559140,LOC107570649,LOC107688857,LOC107688849,LOC107754978 coding downstream 142612 13625224 ~ 13639334 (-)
irf7 LOC107675276,LOC107562829 coding upstream 323457 14183076 ~ 14188343 (-)
hic1l LOC107707545,LOC107675304,LOC107562834,LOC107558318,LOC107709953,LOC107675382 coding upstream 376164 14235783 ~ 14243209 (-)
LOC122330315 LOC107675385,LOC107558317,LOC107707546,LOC107675305,LOC107562826,LOC107709937 coding upstream 383827 14243446 ~ 14256791 (-)
LOC122330318 NA coding upstream 397498 14257117 ~ 14261412 (-)
LOC122330316 mlkl coding upstream 401885 14261504 ~ 14266148 (-)
G169484 NA non-coding downstream 45272 13735869 ~ 13736674 (-)
G169456 NA non-coding downstream 393863 13387301 ~ 13388083 (-)
G169451 NA non-coding downstream 498788 13282937 ~ 13283158 (-)
G169446 NA non-coding downstream 519257 13262397 ~ 13262689 (-)
G169426 LOC106958509,LOC103130467,LOC106963510,LOC107690788,LOC107723971 non-coding downstream 573807 13200164 ~ 13208139 (-)
LOC122330424 NA non-coding upstream 10586 13870205 ~ 13870719 (-)
G169504 LOC107709942,LOC107709941,LOC107675371,LOC107573038,LOC107576507,LOC107575432,LOC107573040 non-coding upstream 112768 13972387 ~ 14123124 (-)
G169510 NA non-coding upstream 151266 14010885 ~ 14021484 (-)
G169506 LOC107675371,LOC107573038,LOC107574376 non-coding upstream 165781 14025400 ~ 14042328 (-)
G169507 LOC107659785,LOC107573038,LOC107571418 non-coding upstream 179107 14038726 ~ 14109084 (-)
nudt7 LOC107677825,LOC107574414,LOC107723962,LOC107572225,LOC107698160 other downstream 65924 13712766 ~ 13716022 (-)
LOC122330868 LOC106958509,LOC107723095,LOC106963510,LOC107690788,LOC107671222,LOC107579420 other downstream 541562 13222632 ~ 13240384 (-)
faap24 faap24,LOC107555687,LOC107566261 other downstream 600057 13178613 ~ 13181889 (-)
LOC122330809 LOC107679978 other downstream 657204 13071630 ~ 13124742 (-)
sall1b sall1b,LOC107679982,LOC107752461,LOC107659864,LOC107555696,LOC107570025 other downstream 800292 12973146 ~ 12981654 (-)
G169495 NA other upstream 35431 13895050 ~ 13895600 (-)
LOC122330416 NA other upstream 72506 13932125 ~ 13932674 (-)
G169503 si:dkey-234i14.9 other upstream 111810 13971429 ~ 13972004 (-)
LOC122331290 NA other upstream 129717 13989336 ~ 13989913 (-)
LOC122330425 NA other upstream 132633 13992252 ~ 13992849 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location