LOC122331290


Basic Information

Item Value
gene id LOC122331290
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 13989336 ~ 13989913 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2657
GAGACACTTTAcatgagagtgtttatagtgctgtgagtttaacacttcatgactgagagcagaacacaacacaatcttcatcatcacacaagactcaactactacaatgaacaacatcctcatcctcatctggactcTGACTCTCTGTATTCAGGagatCTGGGGACAAGTAACAGTGACTCAGAATCcagaaataaaatccatcaaacAAGGAGAAACTGTTACGATCAGCTGTAAAACCAGTCAGAGTCTTATTTCTGGCTGTAGTGACTGTGTGTCTTGGTATcagcagaaacctggagaagctcctaaactcctgaTTCATGACATAAACAGACtccagtcaggaactccatctagattcagtggaagtggatcaAGCTATGGAAGTGATTTTTCTCTGACTATCAGAGacgtccagactgaagatacaggagattattactgtatgGCTATAAACTATATCAGTAATAGCtgggtgttcacacagtga

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2657 True 493 V_gene_segment 0.41 2 13989336 13989913

Neighbor

gene id symbol gene type direction distance location
rfwd3 rfwd3,LOC107677830,LOC107688729,LOC107723989,LOC107572234,LOC107754982,LOC107574413 coding downstream 297632 13683352 ~ 13691704 (-)
glg1a glg1a,LOC107559147,LOC107688714,LOC107677828,LOC108428438 coding downstream 306537 13662920 ~ 13682799 (-)
si:dkey-234i14.2 LOC107754985,LOC107677826,LOC107572228,LOC107559149 coding downstream 332850 13642308 ~ 13656486 (-)
urahb LOC107688889,LOC107723959,LOC107559139 coding downstream 347394 13640592 ~ 13641942 (-)
tdrd12 LOC107677829,LOC107559140,LOC107570649,LOC107688857,LOC107688849,LOC107754978 coding downstream 350002 13625224 ~ 13639334 (-)
irf7 LOC107675276,LOC107562829 coding upstream 193163 14183076 ~ 14188343 (-)
hic1l LOC107707545,LOC107675304,LOC107562834,LOC107558318,LOC107709953,LOC107675382 coding upstream 245870 14235783 ~ 14243209 (-)
LOC122330315 LOC107675385,LOC107558317,LOC107707546,LOC107675305,LOC107562826,LOC107709937 coding upstream 253533 14243446 ~ 14256791 (-)
LOC122330318 NA coding upstream 267204 14257117 ~ 14261412 (-)
LOC122330316 mlkl coding upstream 271591 14261504 ~ 14266148 (-)
G169490 LOC107687028 non-coding downstream 14718 13806085 ~ 13974618 (-)
G169493 LOC107687028 non-coding downstream 36045 13802856 ~ 13953291 (-)
LOC122330424 NA non-coding downstream 118617 13870205 ~ 13870719 (-)
LOC122330415 igl4v8 non-coding downstream 129717 13781946 ~ 13859619 (-)
LOC122330432 NA non-coding downstream 178249 13810577 ~ 13811087 (-)
G169510 NA non-coding upstream 20972 14010885 ~ 14021484 (-)
G169506 LOC107675371,LOC107573038,LOC107574376 non-coding upstream 35487 14025400 ~ 14042328 (-)
G169507 LOC107659785,LOC107573038,LOC107571418 non-coding upstream 48813 14038726 ~ 14109084 (-)
G169516 NA non-coding upstream 68097 14058010 ~ 14135254 (-)
G169505 LOC107675371,LOC107573040,LOC107573038 non-coding upstream 116738 14106651 ~ 14118319 (-)
G169503 si:dkey-234i14.9 other downstream 17332 13971429 ~ 13972004 (-)
LOC122330416 NA other downstream 56662 13932125 ~ 13932674 (-)
LOC122330422 NA other downstream 89496 13832814 ~ 13899840 (-)
G169495 NA other downstream 93736 13895050 ~ 13895600 (-)
G169497 NA other downstream 115698 13838001 ~ 13873638 (-)
LOC122330425 NA other upstream 2339 13992252 ~ 13992849 (-)
LOC122331294 NA other upstream 93795 14083708 ~ 14087925 (-)
G169622 NA other upstream 697533 14687446 ~ 14688589 (-)
G169631 NA other upstream 764261 14754174 ~ 14754827 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other upstream 1039188 15029101 ~ 15052924 (-)

Expression


Co-expression Network