LOC122331058


Basic Information

Item Value
gene id LOC122331058
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 16525038 ~ 16525745 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU251941
ggagagctggtatctctcagacggctgctcaggaggatgggagacgaggctctggtgatcgtgacccagagcagcccctgagccaagagctaccaggatacatcgcacctctgccttctgacctggctgtttctgtgtccacagatcagcctcacaggaagaggaagcggcagagcggcggccgggaggatgaagggccgtctacctccaacacaagaccagccaaacgctcccgcagagAAGCGTACGCCAAGGGCCCGTTGCTGggccgaggtggattcggctcggtgcatgctgggatacgcaggtccgacagactgccaGTCGCCATCAAGTACGTTTGCAAAAGCAGGGCGCCTGAGACGCTGAACGTGgaaggtcagggtctgctgccgctggaggtggcgttgatgaccctggtcagttcggctcctgcctgcccaaacgtcctgcagctgctggagtggt
>XR_006248120.1
gggccgtctacctccaacacaagaccagccaaacgctcccgcagagAAGCGTACGCCAAGGGCCCGTTGCTGggccgaggtggattcggctcggtgcatgctgggatacgcaggtccgacagactgccaGTCGCCATCAAGTACGTTTGCAAAAGCAGGGCGCCTGAGACGCTGAACGTGGTGAGTTGAAGGTGAATctgttgtgaatctgcattcagctctggatgtgacggatctttggtctctgcaggaaggtcagggtctgctgccgctggaggtggc

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251941 True 468 lncRNA 0.62 4 16525038 16525745
XR_006248120.1 False 282 lncRNA 0.59 3 16525100 16525551

Neighbor

gene id symbol gene type direction distance location
LOC122331314 LOC107600734,LOC107716905,LOC107683095 coding downstream 34354 16483237 ~ 16490684 (-)
LOC122331312 LOC107683095 coding downstream 41392 16473389 ~ 16483646 (-)
LOC122331045 lamb1,lamb1a,LOC107595246,LOC107739090,LOC107662456,LOC107703183 coding downstream 51133 16470780 ~ 16473905 (-)
LOC122330713 islr2,LOC107751265,LOC107589315,LOC107749605,LOC107595243 coding downstream 61559 16459717 ~ 16463479 (-)
ccdc33 LOC107703187,LOC107751273,LOC107578173,LOC107662475 coding downstream 284367 16229300 ~ 16240671 (-)
lamb4 lamb4,LOC107712510,LOC107589316,LOC107703192 coding upstream 40440 16566185 ~ 16583454 (-)
acot19 zgc:101553,LOC107703184 coding upstream 62701 16588446 ~ 16596550 (-)
ubl7a ubl7a,ubl7,LOC107703185,LOC107662472,LOC108436908,LOC107595265 coding upstream 70943 16596688 ~ 16602696 (-)
LOC122330377 LOC107662483,LOC107739067,LOC107595271,LOC107712506,LOC107589317,LOC107703193,LOC101884359 coding upstream 81996 16607741 ~ 16618322 (-)
scamp5a scamp5,scamp5a,LOC108436905,LOC107589318,LOC107703195,LOC107662455,LOC103363822,LOC107395508 coding upstream 95226 16620971 ~ 16628483 (-)
G169967 NA non-coding downstream 166364 16347472 ~ 16358674 (-)
G169908 NA non-coding downstream 459058 16061441 ~ 16065980 (-)
G169910 LOC107675266,LOC107751276,LOC107589308 non-coding downstream 460614 16063999 ~ 16064424 (-)
G169852 NA non-coding downstream 721426 15802951 ~ 15803612 (-)
G169837 NA non-coding downstream 860147 15664085 ~ 15664891 (-)
G170179 tmem266,LOC107557978,LOC107739101 non-coding upstream 587724 17113469 ~ 17119681 (-)
G170176 NA non-coding upstream 594037 17119782 ~ 17125993 (-)
G170210 NA non-coding upstream 637060 17162805 ~ 17163323 (-)
G170214 NA non-coding upstream 658269 17184014 ~ 17189055 (-)
G170090 lamb1,lamb1a,LOC107703183,LOC107595246,LOC107662456,LOC107589344 other downstream 23448 16500177 ~ 16501590 (-)
G169989 LOC107600734,LOC107683095,LOC107716905 other downstream 50373 16473722 ~ 16474665 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other downstream 67690 16455031 ~ 16457348 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other downstream 773458 15742529 ~ 15751580 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other downstream 922190 15584551 ~ 15602848 (-)
LOC122331057 lamb1a,lamb1,LOC107662456,LOC107595246,LOC107703183 other upstream 11188 16536933 ~ 16565638 (-)
G170123 LOC107712515,LOC107589322 other upstream 250089 16775834 ~ 16777239 (-)
G170177 etfa,LOC107712526,LOC107557988,LOC107688945,LOC107589358,LOC107739100 other upstream 600323 17126068 ~ 17132042 (-)
G170225 NA other upstream 699697 17225442 ~ 17226023 (-)

Expression


Co-expression Network