G169989 (LOC107600734,LOC107683095,LOC107716905)


Basic Information

Item Value
gene id G169989
gene name LOC107600734,LOC107683095,LOC107716905
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 16473722 ~ 16474665 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU251807
ccgacagactgccaGTCGCCATCAAGTACGTTTGCAAAAGCAGGGCGCCTGAGACGCTGAACGTGgaaggtcagggtctgctgccgctggaggtggcgttgatgaccctggtcagttcggctcctgcctgcccaaacgtcctgcagctgctggagtggttcgaccatcgcagacgctacaccatgatcctggagcgtcccgttccttgccaagatctccagagtttctgcgaggagaacggatgtctggaggagactctggccaagaaagtcctgctgcagctgatcacggcgctgaaacactgcaagagccgcggagtcctgcaccgggacgtcaaaccggagaatctgctgatctccactgagtcccacgacatcaagctgatggacttcggctgtggagatctgctgcgaGACTCGGCCTACCAACACTTTGCAGgcactcttcaatacgcccctcctgagtggtttcggcagcatctctatcacgcaggaccggctacggtttggtcggtcggggtgacgctctacagcatcctgtgcggctgtttccccttcagaggagcacgGAAGGACACCTCCAGAAgaagactgcgcttccctagacAGCTGTCTAGAGGCAAGAGACAGacgtcacgtccagatccaggtgaagcgtgtgcttttgtgttgctgaagactgtgttgtgtgtaac

Function

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251807 True 694 TUCP 0.58 4 16473722 16474665

Neighbor

gene id symbol gene type direction distance location
LOC122330713 islr2,LOC107751265,LOC107589315,LOC107749605,LOC107595243 coding downstream 10243 16459717 ~ 16463479 (-)
ccdc33 LOC107703187,LOC107751273,LOC107578173,LOC107662475 coding downstream 233051 16229300 ~ 16240671 (-)
pkp3a LOC107675274,LOC107751269,LOC107589311,LOC107745414,LOC107662457 coding downstream 282064 16175757 ~ 16191658 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107662464,LOC107742043,LOC107595240 coding downstream 387937 16074750 ~ 16085785 (-)
trnar-acg_44 NA coding downstream 416228 16057422 ~ 16057494 (-)
LOC122331314 LOC107600734,LOC107716905,LOC107683095 coding upstream 8572 16483237 ~ 16490684 (-)
lamb4 lamb4,LOC107712510,LOC107589316,LOC107703192 coding upstream 91520 16566185 ~ 16583454 (-)
acot19 zgc:101553,LOC107703184 coding upstream 113781 16588446 ~ 16596550 (-)
ubl7a ubl7a,ubl7,LOC107703185,LOC107662472,LOC108436908,LOC107595265 coding upstream 122023 16596688 ~ 16602696 (-)
LOC122330377 LOC107662483,LOC107739067,LOC107595271,LOC107712506,LOC107589317,LOC107703193,LOC101884359 coding upstream 133076 16607741 ~ 16618322 (-)
G169967 NA non-coding downstream 115048 16347472 ~ 16358674 (-)
G169908 NA non-coding downstream 407742 16061441 ~ 16065980 (-)
G169910 LOC107675266,LOC107751276,LOC107589308 non-coding downstream 409298 16063999 ~ 16064424 (-)
G169852 NA non-coding downstream 670110 15802951 ~ 15803612 (-)
G169837 NA non-coding downstream 808831 15664085 ~ 15664891 (-)
LOC122331058 NA non-coding upstream 50373 16525038 ~ 16525745 (-)
G170179 tmem266,LOC107557978,LOC107739101 non-coding upstream 638804 17113469 ~ 17119681 (-)
G170176 NA non-coding upstream 645117 17119782 ~ 17125993 (-)
G170210 NA non-coding upstream 688140 17162805 ~ 17163323 (-)
G170214 NA non-coding upstream 709349 17184014 ~ 17189055 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other downstream 16374 16455031 ~ 16457348 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other downstream 722142 15742529 ~ 15751580 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other downstream 870874 15584551 ~ 15602848 (-)
G169808 NA other downstream 890087 15248955 ~ 15583635 (-)
LOC122331105 abcc8,LOC107675473 other downstream 922919 15502621 ~ 15550803 (-)
G170090 lamb1,lamb1a,LOC107703183,LOC107595246,LOC107662456,LOC107589344 other upstream 25512 16500177 ~ 16501590 (-)
LOC122331057 lamb1a,lamb1,LOC107662456,LOC107595246,LOC107703183 other upstream 62268 16536933 ~ 16565638 (-)
G170123 LOC107712515,LOC107589322 other upstream 301169 16775834 ~ 16777239 (-)
G170177 etfa,LOC107712526,LOC107557988,LOC107688945,LOC107589358,LOC107739100 other upstream 651403 17126068 ~ 17132042 (-)
G170225 NA other upstream 750777 17225442 ~ 17226023 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016285 pimr52 coding NC_007113.7 CM002886.2 19518520 ~ 19520690 (-)