trnar-acg_44


Basic Information

Item Value
gene id trnar-acg_44
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 16057422 ~ 16057494 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2662
GGGccagtggcgcaatggataacgcgtctgactacggatcagaagattccaggttcgactcctggctggctcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2662 True 73 tRNA 0.59 1 16057422 16057494

Neighbor

gene id symbol gene type direction distance location
pdcd2l LOC107751282 coding downstream 795 16052180 ~ 16056627 (-)
trnar-acg_42 NA coding downstream 1568 16055782 ~ 16055854 (-)
LOC122331055 banp,LOC107742045,LOC107751277 coding downstream 6058 16014176 ~ 16051364 (-)
LOC122331076 LOC107718048,LOC107742049,LOC107675457,LOC107595237,LOC107549253,LOC107675240,LOC107683074 coding downstream 48292 15803804 ~ 16009130 (-)
LOC122330598 LOC107758758,LOC107675301,LOC107549274,LOC107742051,LOC107595235,LOC107675471,LOC100003291 coding downstream 289739 15753791 ~ 15767683 (-)
fbxo31 fbxo31,LOC107675295,LOC107751272,LOC107662464,LOC107742043,LOC107595240 coding upstream 17256 16074750 ~ 16085785 (-)
pkp3a LOC107675274,LOC107751269,LOC107589311,LOC107745414,LOC107662457 coding upstream 118263 16175757 ~ 16191658 (-)
ccdc33 LOC107703187,LOC107751273,LOC107578173,LOC107662475 coding upstream 171806 16229300 ~ 16240671 (-)
LOC122330713 islr2,LOC107751265,LOC107589315,LOC107749605,LOC107595243 coding upstream 402223 16459717 ~ 16463479 (-)
LOC122331045 lamb1,lamb1a,LOC107595246,LOC107739090,LOC107662456,LOC107703183 coding upstream 413286 16470780 ~ 16473905 (-)
G169852 NA non-coding downstream 253810 15802951 ~ 15803612 (-)
G169837 NA non-coding downstream 392531 15664085 ~ 15664891 (-)
G169811 LOC107758749,LOC107744184 non-coding downstream 508610 15494274 ~ 15548812 (-)
G169812 LOC107744184,LOC107758749,LOC107675459 non-coding downstream 563343 15489903 ~ 15494079 (-)
G169804 NA non-coding downstream 601220 15136299 ~ 15456202 (-)
G169908 NA non-coding upstream 3947 16061441 ~ 16065980 (-)
G169910 LOC107675266,LOC107751276,LOC107589308 non-coding upstream 6505 16063999 ~ 16064424 (-)
G169967 NA non-coding upstream 289978 16347472 ~ 16358674 (-)
LOC122331058 NA non-coding upstream 467544 16525038 ~ 16525745 (-)
G170179 tmem266,LOC107557978,LOC107739101 non-coding upstream 1055975 17113469 ~ 17119681 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other downstream 305842 15742529 ~ 15751580 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other downstream 454574 15584551 ~ 15602848 (-)
G169808 NA other downstream 473787 15248955 ~ 15583635 (-)
LOC122331105 abcc8,LOC107675473 other downstream 506619 15502621 ~ 15550803 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other downstream 1004498 15029101 ~ 15052924 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other upstream 397537 16455031 ~ 16457348 (-)
G169989 LOC107600734,LOC107683095,LOC107716905 other upstream 416228 16473722 ~ 16474665 (-)
G170090 lamb1,lamb1a,LOC107703183,LOC107595246,LOC107662456,LOC107589344 other upstream 442683 16500177 ~ 16501590 (-)
LOC122331057 lamb1a,lamb1,LOC107662456,LOC107595246,LOC107703183 other upstream 479439 16536933 ~ 16565638 (-)
G170123 LOC107712515,LOC107589322 other upstream 718340 16775834 ~ 16777239 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) trnar-acg_10 NA coding NC_047613.1 CM018559.1 20289453 ~ 20289525 (+)
mexican tetra (Astyanax mexicanus) trnar-acg_10 NA misc NC_035899.1 CM008302.1 53635900 ~ 53635972 (+)